KEGG T02995: 102699269

Oryza brachyantha (malo sina): 102699269

Entry

102699269         CDS       T02995

Name

(RefSeq) helicase and polymerase-containing protein TEBICHI

K02349

DNA polymerase theta [EC:2.7.7.7]

Organism

obr Oryza brachyantha (malo sina)

Brite

KEGG Orthology (KO) [BR:obr00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:obr03400]
    102699269
Enzymes [BR:obr01000]
2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     102699269
DNA repair and recombination proteins [BR:obr03400]
Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    102699269

SSDB

Motif

Pfam:

DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C ResIII LAMTOR HHH_5 Helicase_dom4_arc

Other DBs

NCBI-GeneID:

102699269

NCBI-ProteinID:

XP_015698275

Position

12:7460526..7482904

AA seq 2081 aa
MASGSSRANIDQFFPAKKRRPSSRKDEPPSGSPGGAKGSLEGFLVRSPSAAPPPTSGSPS
GGGDAGARRSLSAAMDVDVGHPASAVAKDKGDLELKRIAMEFLSHYCSAIPSVMGDAGNG
EADKKQKRSATQSFLVPCSNASAKKQRVAHCGGLEALKDVGHQTLFQEQCGTHYGCSDAL
EELGEVAKVSSEGFVAWQRCSFTPNTGQKKVGFSTAPGAGETPRSVSTKSLISPGEEFWN
AAIEFADGISAQADKGLRRPECDVDDKSSCAVALCSKILPRSGQVDIDYEKTVGSNETKY
MDESSSKEGSVAANSHHVNSSPLPVKHLDFFHEDEIQVPGLKTKQKGGTVDVNHKGQLKN
SSFQRVDNLMHSVDDMNKNTSDMRIDSSATTHNGRLFKLTTAGTNHPTRVGASGFSPTKR
DLNQLIHSADKMLTACSNHDKPNKDCTNKFASQETEANTPTSSVLQKDHSKLSSWLPPEL
CAIYMKKGISQLYPWQVECLLVEGVVEKRNLVYCASTSAGKSFVAEVLMLRRILFSGKMA
ILVLPYVSICAEKAEHLEQLLEPLGRHVRGFYGNQGGGSLPKDTSVAVCTIEKANSLVNK
LLEDGRLSELGIIVIDELHMVGDQHRGYLLELMLTKLRYAAGEGNSESSSAETSGSSSGK
MDATHGLQIIGMSATMPNVAAVADWLQAALYQTEFRPVPLEEFIKVGNQVFDKDMNVVRV
LPKVADLGGKDPDHIVELCNEVVLQGHSVLLFCSSRKGCESTARHIAKFLKSTSIGSSDV
DSEFADATCAIEALKRSPSGLDPVLEETLPFGVAYHHAGLTVEEREIVETCYRKGLVRVL
TATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMSGRAGRTGIDTKGESILLCKPEE
VKRITCILRSNCPPLESCLSEDKNGMTHAIMEVVAGGIVQTASDINRYVRCTLLNSTKPF
EDVVKSAQDSLRWLCHKRFLEWNNESKIYSTTPLGRAAFGSSLNPEESLVVLDDLSRARE
GFVLASDLHLVYLVTPINVDVEPDWELYYERFMQLTSLEQSVGNRVGVIEPFLMHMAHGA
AMPVRGKRQLTGIRNRSPTRGSGGNALINAQTLRVSKRFYVALMLSRLAQEIPVTDVCEA
FKVARGMIQALQENAGRFASMVSVFCQRLGWHDLEGLVAKFQNRVCFGVRAEIAELTSIP
FVKGSRARALYKSGLRTPVAIAEASIPEIAKALFESSTWSGQDDSGLRRMQLGIAKKIKN
GARKIVLEEAEAARVAAFSAFKSLGVQVPQFTTPLLSTIDEPPTRDNMVSHGRGQAKCHD
PTLGMHGSGDRNICFSYGAQRASAESALGNDMHPGSSKQITESAGIANNVNISVQEASPL
STGTIDKLSSRNVADKGPVNAYNFPGGFDSFLDQWSTVSEFSFDLHYVKKSIKSSSIFFD
ILGLAVCWENSPVYYCNFPKDLMIAGSNDSIEMWEELTRRWNRIIEIMRRNNVKKMTWNL
KVEIQALKYPCVSCQRLARLHLDYKMLKNVEVLDNLYVFLPPISVHSGLDICLVAWVLWP
DEESKTVPNLEKLVKRRLHHEAAAAATRDGRWRNQMHKAAHNGCCRRAAQTRALGSVLRK
LLVSHNLNGLLETIEGPLVNVLADMELWGIGADMDACLHARHIIIKKLKELEKEAYKLAG
KSFSLNSTADIADILYTHLKLPAPKGCEKGKLHPSTNKQSLDHLRDQHPIISVIKEHRTL
AKLLNGTLGSICSRAQLCSKSQRYIIQGNWLQTSTATGRLSMEEPNLQCVEHLLDFTTLK
NDYDSTVDHHEINARDFFVPTRENWLLITADYSQIELRLMAHFSKDPTLIELLNKPDGDV
FTMITSRWSGKEESLICSKERETTKRFIYGILYGMGANSLAEQLQCSPEDAAQKIQSFKR
FFPGVSSWLHEAVASCRQKGYVETLMGRRRFLSKITVGNSKEKAKAQRQAVNSICQGSAA
DIIKVAMIKVHSVITNGRMMGTTDDFTDEVMQKFSEIRGRCHLILQVHDELVLEVDPCMV
AEAGRLLQTVMGNAASLLVPLRTKIKVGKTWGSLEPFHPEP

NT seq 6246 nt +upstreamnt +downstreamnt
atggcgtcgggctcctctcgagccaacatcgaccagttttttccggccaagaagcggagg
ccctcgtcgcgcaaggacgagccgccgtccgggagcccggggggcgcgaaggggtccctg
gaaggattccttgtccggtccccttctgccgcgccgccgcccacctcgggctcgccgagt
ggtggtggggacgcgggcgccagaaggagcctctccgcggcgatggatgtcgatgtcggc
catcccgcctcggcggtggcgaaagataaaggggatttggagctgaagagaattgccatg
gaattcttgtcccattactgcagtgctatcccttctgtcatgggtgatgctggcaatggt
gaagcggacaagaagcagaagaggagtgcgacccagtcgttcttggtcccttgtagcaat
gcatctgccaagaagcagcgggttgctcattgtgggggtctggaagctctaaaggatgta
ggccatcaaacactcttccaggaacaatgtggcactcattatggttgctcggatgctctg
gaggaattaggtgaggtggcaaaggtgagcagtgagggttttgtggcctggcagcgatgt
agctttaccccaaatactggacagaagaaggttggattctcaacagcacctggggctggg
gagacaccgaggtctgtatccacgaaatcgctgatctcaccaggggaggaattctggaat
gcagcaattgaatttgctgatggcatttctgctcaggctgacaagggccttagaaggcct
gaatgtgatgtggatgacaagtcatcttgtgctgttgcattgtgctccaagattcttccc
agatcaggtcaggttgatatcgactatgaaaagacagtaggcagcaatgagacaaagtac
atggacgaatcttcaagtaaagaaggatcagtggcagcaaatagtcatcatgtaaacagc
tccccattgcctgtgaagcatttggacttctttcatgaggatgaaattcaagttccaggc
ctaaaaactaaacaaaagggtggcactgtagatgtgaaccataagggtcaactgaagaac
agtagctttcagagagtagataatctcatgcattctgtagatgacatgaacaaaaatact
tcagacatgcgcattgattcttcagctacaactcataatgggcgtttgttcaagttaaca
actgcaggaacaaatcatccaacaagagtgggtgccagtggctttagtccgactaaaaga
gacctcaaccaactgatccatagtgcggataaaatgcttactgcatgttcaaatcatgac
aagcctaacaaagattgtacaaataaatttgcatctcaagaaacggaagccaacactcct
actagctcagttctccagaaggatcactcaaagctgtcaagctggctgccccctgagctc
tgtgctatatacatgaaaaagggcatttcacagttgtatccttggcaggtggaatgttta
cttgtggaaggtgtcgtggagaaacgcaatcttgtgtactgtgcatctacaagtgctggt
aaaagttttgttgctgaagttctaatgctgagacggatattgttcagtggaaagatggca
atccttgtccttccctatgtgtcaatatgtgctgaaaaggctgaacatctcgaacaactt
cttgagccactaggcaggcatgttcgtggcttctacggaaatcaggggggagggtcactt
cctaaagatacgtcagttgctgtatgtactatagagaaggcaaattctttggtaaacaag
ttgttggaggatggccgcctctctgaacttggtataattgtaatagatgagcttcatatg
gttggtgaccaacaccgagggtatcttttggagctgatgctgacaaagcttcggtatgca
gctggtgaaggaaattcagaatcatctagtgcagaaacctcaggttctagcagtgggaag
atggatgcaactcatgggttgcagattattggtatgagtgctactatgcccaatgttgca
gctgtagctgattggcttcaagctgcactttaccaaacagaatttcgaccagttccgctg
gaggagtttattaaagtcggtaatcaggtctttgataaagatatgaacgttgttcgcgtg
cttccaaaagtagctgaccttggtggtaaggatccagaccatattgttgagttgtgcaat
gaggttgttctacaggggcattctgttcttttgttttgctccagccgcaaaggctgtgaa
tcaactgcaagacacattgccaagttcttgaaatcaacttctattggatcaagtgatgtt
gactcagaatttgcagatgccacatgtgcaattgaagccttgaagaggagtccttctggg
ttagatcctgtattagaagagacccttccttttggagttgcataccatcatgctggatta
acggttgaagagagggagattgtagaaacatgctaccgtaaaggtcttgtcagagtattg
actgccacttcaactttggctgctggagttaacttgcctgccagacgagtaatatttagg
caacctaggataggtcgtgacttcattgatggaactcgctacagacagatgtctggtcgt
gctggcagaactggaatagatacaaaaggggagagtatacttctatgcaagcctgaagaa
gtcaagaggattacatgtattcttagaagtaattgtcctcccttagagtcttgcctttca
gaagataaaaacggaatgactcatgcaatcatggaggttgttgctggcggaattgtgcaa
actgcaagtgatatcaatcgatatgtgaggtgtacgctgcttaactcaactaaacctttt
gaggatgttgtgaagtcagctcaagactcccttcgttggttatgccataaaaggtttctt
gagtggaataatgaaagtaaaatatactccactacaccacttgggcgagcagcttttggc
agttcacttaatcctgaggaatcattggttgtgctggatgatctttcaagggcaagagaa
ggctttgttctggcatctgatttgcatttggtttacctggtgacccccataaatgtggat
gttgaacctgattgggaattgtattatgagaggttcatgcaacttacttcgcttgagcag
tcagttggcaacagggttggagtaatagaaccatttttgatgcacatggctcatggggct
gcaatgcctgttcgtggaaagcgtcagctcactggtatccgcaacagatcaccaactcga
ggttctggtggaaatgctcttattaatgcacagacacttcgagtgtctaaacgcttttat
gtggccttaatgttgtcaaggcttgcacaggaaattcctgtcacagatgtttgtgaggca
tttaaagttgcaagaggtatgattcaagccttacaggaaaatgctggcaggtttgcttca
atggtttctgtgttttgtcagagacttggttggcatgatttagaaggccttgttgctaag
ttccaaaaccgtgtctgttttggagttagggcagagattgcagaacttacgtcaattcca
tttgtcaagggctcacgtgccagggctctctataagtctggtttgcgtactcctgttgcc
attgctgaagcatctattcctgaaattgcaaaggctctttttgaatcttctacttggtct
ggccaagatgattctggtttacggcgaatgcaattgggtattgccaagaagataaaaaat
ggagctcgcaaaatagttcttgaggaggcagaagcagctagggtagcggcattctcagct
ttcaagtcacttggtgtacaagttcctcagttcactacacctctactctcaactatcgac
gaacctccaactcgagataacatggtttctcatggcagaggtcaagctaagtgccatgat
cccactttagggatgcatggtagcggtgatagaaatatatgctttagctatggtgctcaa
agggcttcagcagagagtgctttagggaacgatatgcaccctggttcttccaaacaaata
acagagagtgcaggaatagccaataatgtcaacatcagtgtccaagaagcatcacctttg
tccacaggaactattgataaattgagtagcagaaatgtggctgacaaaggccctgttaat
gcatataatttcccaggagggtttgacagttttcttgatcaatggtctactgttagtgag
ttttcttttgatcttcattatgttaagaaatcaattaaatcatcttcaatctttttcgat
attcttggtttagctgtctgttgggaaaattcacctgtctactactgcaactttccaaaa
gacctcatgatagctggtagcaatgattccattgaaatgtgggaggaactaacaaggaga
tggaaccggataattgaaattatgcgacgaaacaatgtgaaaaaaatgacgtggaacttg
aaggtcgagattcaagcattgaagtatccatgtgtttcttgtcaacgacttgctaggctt
catcttgactacaaaatgttgaagaatgttgaagtactggacaacttgtatgtgtttcta
ccaccaatttctgtccacagtggattggacatatgcttggtggcatgggttctctggcct
gacgaggaaagtaaaacagtgccaaatcttgagaagttagtgaagagacgactacaccat
gaagctgcagcagctgcaactcgagatggtagatggagaaatcagatgcacaaagcagct
cataatggttgctgtcggcgtgctgcgcagacacgggcactgggttctgttttgaggaaa
ttacttgtttctcataatctcaatggtttgctagagacaattgagggtccattggtgaat
gttcttgctgatatggaactttggggaattggtgctgacatggatgcatgtctccatgcg
aggcatatcataataaaaaagctgaaagaactagagaaagaagcatataaattagcggga
aagagtttctcgctaaattcaactgctgatattgctgacattctttatacacacctaaaa
ctgccagctccgaaaggttgtgagaaaggaaagttgcatcctagcaccaacaagcagtcc
ctagaccatctaagggatcaacatccaattatatcagtaattaaggaacacagaacacta
gcaaaactgttgaatggtacgctggggtccatttgctcacgagctcagttgtgcagcaaa
tcacaaaggtacatcatacaaggaaattggctccagacatcaactgccactggccgtcta
tcaatggaagagcccaatctccagtgtgttgagcacttgctggatttcacaacattgaag
aatgattatgattcaacggttgatcatcatgaaatcaatgctcgtgattttttcgttccc
actagagagaattggttgctgataactgctgattactcacagattgagctgcgtttaatg
gctcatttttctaaagatcccacattgattgaattgttaaataaaccagatggtgatgta
tttactatgattacttcaagatggtctggtaaagaagagtcattgatctgttcaaaggaa
agagagaccacaaaaagatttatttacggcatcctctatggaatgggtgccaactctcta
gcagaacaacttcaatgcagcccagaggatgctgcacagaaaatccaaagttttaagagg
ttctttcctggtgtctcttcatggctacacgaagctgtggcatcatgtcgccagaaaggg
tatgtggagaccttaatgggaaggagacgttttctttcaaaaataacagttggaaatagc
aaggagaaagccaaggcacagagacaagcagttaattctatttgtcagggttctgcagct
gatattatcaaggtggctatgattaaagttcactctgtaattacaaatgggagaatgatg
ggaactacagatgatttcactgatgaggttatgcagaaattttcagaaatcagaggccgc
tgtcaccttattttgcaggtgcatgatgaattggtgcttgaagttgatccgtgtatggta
gcagaggctggaaggttactgcagacagtcatggggaacgcagcttcacttttagtgcct
ttacgcactaaaataaaggtcgggaaaacttggggttctctagaacccttccatccagaa
ccttga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (9)   
   Pfam (9)   
All databases (26)   

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