KEGG   Oryza brachyantha (malo sina): 102701484
Entry
102701484         CDS       T02995                                 
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog A
  KO
K08775  breast cancer 2 susceptibility protein
Organism
obr  Oryza brachyantha (malo sina)
Pathway
obr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:obr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    102701484
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:obr04121]
    102701484
   03036 Chromosome and associated proteins [BR:obr03036]
    102701484
   03400 DNA repair and recombination proteins [BR:obr03400]
    102701484
Ubiquitin system [BR:obr04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   BRCC complex
    102701484
Chromosome and associated proteins [BR:obr03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Other centrosome duplication proteins
     102701484
DNA repair and recombination proteins [BR:obr03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA complex
     102701484
   FA (Fanconi anemia) pathway
    Downstream FA components
     102701484
SSDB
Motif
Pfam: BRCA2 BRCA-2_OB1 BRCA-2_helical BRCA-2_OB3
Other DBs
NCBI-GeneID: 102701484
NCBI-ProteinID: XP_040376609
Position
1:complement(2319326..2329955)
AA seq 1572 aa
MRRRWQMWGKPDGSLVWIPASDGPPSEAVPGEAPLVPPDPQPDAAAMEDAPSGDEIIEGP
GATDGCSVPSMADLFTQVLDKLVAADERAVAIERAGKGGVFCTGLGRSVAVSDTAIERAK
LLVGEVAEETSNKRRQPFGNGSDLERELGERNVSFKGSVHKDILSPMFQTGSGKAVSLNK
DLIQKAGAVLEGNVENSVVAVQPVQSMFHTELVMTDPISMSSIDKAMPVLEGQTTAKHGD
VADVDDTGLFPLFQTGSGKAVSVSIASIQKAKAVLEQNDESAGNMDDLSRPDQSLIFQNG
SRRPVLISEIANSVVKGGDAGNIVFRTGLGRPAAVSETSIQKARAVLDEDAKRRGYGLTG
VCTTTYQTETPTSVLMSGGLTMTDRSVTPDGDVSIQGKNYGADGHMPLFQTGFGRSISVS
KSSIKRASTLLEPRNITKELEDEANFDGSATPMFKTGSGRSITASENSRKKAHVVLEGDD
PVKNVYNDTGEAIEPILHAGIQKFAPQSRSSSHKANALMEEGSSIKEVRGSEPPMFRTGS
GRSVLITDRSVQRARAVLEEEGNMKRENHKQLNNVDKYIPNFTSPLKTSCIRTVNISSVG
VSRAATLLGLEDNTLSTQLLGHVGDKLGTKINVERENSEHRFDVASVRGVSGGCPMNLGP
AENQVLMDPHQQSTFSKTTVSDSSEQAIKFSTAGGRSMAISSDALQRAKSLLGESDLEVL
PNNFLGHSSASPCKEKLQNSTRLRKGETDLLKTIRGESKTEPAIFSLPAMPDRKHTDSLG
RAIPDTTLANGNSVRFHAARGYHPINEIPKLPKPSSRCSFGTENASDTNDKARRFQMPPG
PLVDITNYMGTHSVKTDSLPTEKRRIGGRNTISTFKRPRSSRFIAPTKINNPSPAGVSKL
PPIQISPCRTKLSSCYPFQHERKSCKEYFGGPPRFKYLTEDITDEVKLMDAKNAEDYKFN
TDTGSEEFQKMLLACGASLTYATKEWTSNHYKWIVWKHASLERCYPTRAAGKFLKVGNVL
EELKYRYDREVNYGHRSAIKKILEGNASPSLMMVLCISAIYSCPDLNNNKPEDDKPHANE
DNSETKILVAAKRNMPAKIELTDGWYSLEATLDLALLEQLEKRKLFIGQKLRIWGASLCG
WSGPVSFHEASGTVKLMIHINGTYRARWDETLGLCKHTGVPLAFKCIKASGGRVPKTLVG
VTRIYPVMYKERLSDGRFMVRSERMERKALQLYHQRVSKIAEDIQSEHGEYCDNTNDNEE
GAKICKMLERAAEPEVLMASLNSEQLLSFSYYQEKQKIVRQNEVAKKVENALKFAGLSSR
DVTPFLKVKVMGLISKQSATKSSQREGLITIWNPTEKQKSDLVEGQIYSVTGLGPSNYFT
EVVYLHARGSSTTWKPLASTQTTNFEPFFTPRKAVELSHFGEIPLASEFDIAGLILYVGN
VYLLNDQNRQWLFLTDGSKFISGEESEEQDDCLLAVNFSSPTTGEDSAFFNSAVSGHIVG
FSNLVKRQKDQMRHMWVAEATESSTYTLSHEIPKKSHLKEAANSAEKWASSSHPMIQHLK
ERVLQIVGDSGG
NT seq 4719 nt   +upstreamnt  +downstreamnt
atgcggaggaggtggcagatgtgggggaagcccgacgggagcctcgtctggatcccggcc
tccgacgggcctccttcggaggcggtgcccggtgaggcgccgcttgttcctcctgacccg
cagccggatgcggcggcgatggaagatgcgccatcgggcgatgagattatcgaaggcccc
ggcgccaccgatggatgcagcgtcccgtcgatggccgacctcttcacccaagttttggat
aagctagttgctgctgatgaaagagccgtggcgatcgagcgtgcagggaagggtggggtg
ttctgcactgggttggggagatcagtggccgtcagcgatacggctatagagagggccaag
ttattggttggggaggtcgcggaggaaacaagtaataagagaaggcaaccatttggcaat
ggttccgatttggaacgcgaattgggagaaagaaatgtttcttttaaaggtagtgtacat
aaagacattttgtctcctatgttccaaactggatcggggaaggcggtttcactaaacaag
gacttgattcagaaggcaggagctgttttagaaggaaatgtcgagaattctgtcgttgct
gtacagcctgtacaatctatgttccatactgaattggttatgacagatccaatcagcatg
agctccattgataaggcaatgcctgttttggagggacaaacaactgcaaaacatggagat
gtggcagatgtggatgatacgggactctttccattgttccaaactggttcaggtaaagct
gtatcggtcagtatagcatctatccagaaagctaaggccgtcctggagcaaaatgatgaa
agtgcaggaaatatggatgatttgagtaggcctgaccaatctctgatcttccaaaatggt
tcacgaagaccagtcttgattagtgaaatagctaactctgtggtgaaggggggagatgct
ggaaacattgttttccgaacaggattagggaggcctgctgcggtgagcgagacctcaatt
caaaaggcaagggcagtactagatgaagatgccaaaagaagaggctatggacttactggt
gtctgcaccaccacttaccaaaccgaaactccaacttctgttttgatgagtggtggtctg
actatgactgatagatctgttacaccggatggagatgtttcaattcaaggaaaaaattat
ggggctgatggtcacatgccattatttcaaactgggtttgggaggtccatttcagttagt
aaaagctcaattaagagagcaagtacactgctggagccaaggaacattacaaaagaattg
gaagatgaagctaattttgatggctctgccactccgatgttcaaaactggatcaggaaga
tctatcacagcaagtgaaaattctagaaagaaagcccatgttgtcttagagggtgacgat
ccagtaaaaaatgtatataatgacactggagaagccattgaaccaatcctccatgctgga
atacagaagtttgcaccccaaagtagaagttcaagtcataaggcaaatgccctcatggag
gaagggagctctataaaagaggtccgtggaagtgaaccgccaatgtttcgaactggatct
gggaggtcagtcttgattactgacagatcggtgcagagggcaagggcggttctggaggaa
gaaggcaatatgaaaagagaaaatcacaagcaacttaataatgtggacaaatatattcca
aattttacttcacctctcaagacaagctgcataaggactgtaaatatatcttcagttggt
gtttctcgagctgcaactttgttgggtttggaggataataccctttcaacacaactttta
ggacatgtgggggataagctaggtacaaagataaatgttgagagggaaaattcagagcac
cgatttgatgtagcatcagtccgtggagtttctggtggctgcccaatgaacttgggccca
gctgaaaaccaagtacttatggatccacatcagcaatctacattttctaaaacaactgtc
tctgattctagtgagcaagcgatcaagttcagcactgctggcggcagatcaatggctatt
tccagtgatgctcttcaacgtgcaaaaagtcttctgggtgaatcggatttagaggtgtta
ccaaataattttttaggtcactcttcagcatctccatgcaaagagaagctgcaaaattca
actcgtctgcgaaaaggtgaaactgatttattgaagacaattaggggggaaagcaaaact
gagccagcaattttttcccttcctgcaatgcctgataggaagcacacagattccttggga
cgtgctatacctgataccactttggctaatggaaattctgtcaggtttcatgcggcaaga
ggttatcatcctatcaatgagattccaaagttacccaagccttcttccagatgttctttt
ggtactgaaaatgcaagtgatactaacgataaggctcgaagattccaaatgccacctgga
ccattggttgacatcactaattacatgggtacacattctgttaaaactgactcccttccc
actgagaagagaagaattgggggaagaaacaccatatctacctttaaacgtccccgttct
tccaggttcatcgcacctacgaaaatcaacaatccatcccctgctggagtatccaaacta
ccaccaattcagatcagtccctgtcgaacaaagttgtcttcatgctatccttttcaacat
gaaagaaaatcgtgcaaagagtattttggtggccctccacgtttcaaatatttgacagaa
gatataacagatgaagtgaagctcatggatgcaaaaaatgctgaggattacaagttcaat
acagatactggttcggaagaatttcagaagatgcttcttgcctgtggtgcttcgttgaca
tacgcaactaaagaatggacgagcaaccactataaatggattgtttggaagcatgcttca
ttggagagatgctatccaactagagctgctggcaaattcttaaaagttggtaatgttttg
gaagagctgaagtacaggtatgacagagaagtgaactatggccaccgctcagccataaag
aaaattttggaagggaatgcttcaccatctttgatgatggtgctgtgcatctcagctatt
tattcttgtcctgacctaaacaacaataagccagaagatgacaagccacatgcaaatgag
gacaatagtgagactaaaatcttggtagctgctaaaaggaacatgcccgcaaagattgaa
ctaactgatggatggtattctctggaagcgacactagatctggcacttttggagcaacta
gagaaaagaaagctttttataggacagaagcttcggatatggggagcttcactgtgtggt
tggtctgggccagtgtcatttcatgaggcatctggtactgttaaattaatgatccacata
aatggcacctatcgtgcaagatgggatgagactttgggattatgtaagcatactggagtc
ccactggcattcaagtgcataaaagcttcaggtggtagagttcctaagacactggttgga
gttaccaggatttatcctgttatgtacaaggagaggttgtctgatggtcgtttcatggtg
aggtctgaaaggatggaaagaaaagcactacagctgtatcaccagagagtgtctaagatt
gcagaagacatccagtctgaacatggagaatactgtgacaataccaatgataacgaggaa
ggggcaaaaatatgcaagatgctagaacgggcagctgaacctgaagttctcatggcaagc
ttgaattcagagcagcttctgtctttctcatattatcaagaaaaacaaaagattgttagg
caaaatgaagttgctaagaaggttgaaaatgctctcaaatttgctgggctgagttcaaga
gatgttacaccatttttgaaagtcaaggtgatgggtcttatcagtaaacaatctgccaca
aaatcgagccaaagagaagggttaataacaatttggaaccctaccgagaagcaaaaatcc
gatttggtggagggacagatttattctgtcacaggattggggccttcaaactattttaca
gaagtagtctacttgcatgctagaggatcatctacaacatggaagcctttagcatccaca
cagactacaaattttgaaccatttttcacccctcgtaaagcagttgaattgtcacatttt
ggtgaaataccacttgcaagtgaatttgacattgcaggtcttattttatatgttgggaat
gtttatttattgaacgaccagaataggcagtggctctttttgacagatggatctaaattt
atctccggagaagagtctgaagagcaagatgactgtcttcttgctgttaacttttcttcc
ccaaccactggcgaggactctgcattcttcaattctgccgtttctggacatatagttggt
tttagcaatctggttaagcgacagaaagaccagatgaggcacatgtgggtagctgaggcg
acagagagctccacctatactctatcccacgagatacctaaaaaatcacatctcaaagag
gctgcgaattctgctgaaaaatgggcttcaagttctcatcctatgattcagcatctgaag
gaaagagttttgcaaatagttggtgatagtggtggctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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