KEGG   Oryza brachyantha (malo sina): 102716424
Entry
102716424         CDS       T02995                                 
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform X1
  KO
K04354  serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
obr  Oryza brachyantha (malo sina)
Pathway
obr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:obr00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    102716424
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:obr01009]
    102716424
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:obr03019]
    102716424
   03036 Chromosome and associated proteins [BR:obr03036]
    102716424
Protein phosphatases and associated proteins [BR:obr01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     102716424
Messenger RNA biogenesis [BR:obr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     102716424
Chromosome and associated proteins [BR:obr03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     102716424
SSDB
Motif
Pfam: WD40 ComGF
Other DBs
NCBI-GeneID: 102716424
NCBI-ProteinID: XP_040380888
Position
6:14870159..14878182
AA seq 529 aa
MNPDEGDDRPEEAGAGEAAAGSSSAQAQGQGQPLEWRFAQVFGERAAGEDVQEVDIISAI
EFDKSGDYLATGDRGGRVVLFERTDARDQNASRRELERQDASITRHPEFRYKTEFQSHEP
EFDYLKSLEIEEKINKIRWCQTANNSLSLLSTNDKTIKYWKVQEKKVKQVSVMNLNNSRS
VGTGSTSSSSTSSSRALLPNGGCSDKSSCLNSDILFPPGGYPSLRLPVVVASQDVNLVAR
CRRVYAHAHDYHINSISNNSDGETYLSADDLRINLWNLEVNSQSFNIVDVKPPNMEDLTE
VITCAEFHPTHCNILAYSSSKGSIRLIDLRQSALCDNHSKIFEEHEAPGSRSFFTEIIAS
ISDIKFSRDGRYILSRDYMTLKLWDLNMDSGPVSTFQVHEHLRPRLCDLYENDSIFDKFE
CCLSGDGLRVATGSYGNLFRVFGCTPGSTEATTLEASRNPMRRQIVNPTRPTRTLTSLAR
GVRRGGENQGVDANGNSFDFSTKLLHLAWHPTENSIACAAANSLYMYYA
NT seq 1590 nt   +upstreamnt  +downstreamnt
atgaatcccgacgagggcgacgaccgccccgaggaggcgggggcgggcgaggcggcggcc
ggttcgtcgtcggcgcaggcgcaggggcaggggcaacctttggagtggcggttcgcgcag
gtcttcggcgagcgcgcggccggggaggacgtgcaggaagttgacatcatctctgcaatt
gagtttgataaatccggtgattatcttgccactggagatagaggaggccgtgttgtttta
tttgaaagaacagatgctcgggatcagaatgccagtcggagagaactggagagacaagat
gcttcgattactagacatccagagttccgctacaaaactgaatttcagagtcatgaaccc
gagtttgactatctcaaaagtttggaaatagaggagaagatcaacaagatcaggtggtgc
cagacagccaataattcactctcccttctgtctacaaatgataaaacaatcaaatactgg
aaggtgcaagagaagaaagtaaaacaagtttcagttatgaatttgaacaattctcggagt
gtagggactggtagcacttctagttcaagtactagtagttctagggctcttcttccaaat
ggtggatgttcagacaagtccagttgcttgaacagtgatattttgtttccacccggaggc
tacccttcattacgtttacctgtggtagttgcaagtcaagatgtcaaccttgttgctaga
tgtcgacgtgtatacgctcatgctcatgattaccatattaactctatatcaaacaatagt
gatggcgagacatacctatcagcagatgatctgcgtataaatctatggaatttggaggta
aatagccagagcttcaatattgttgatgtgaagcctccaaacatggaagacctaacggag
gtcattacatgtgcggagttccacccaactcattgtaatatactggcctatagcagttca
aagggttctatccgactcattgatctgcgacaatcagctttgtgtgacaaccattccaag
atatttgaggaacatgaagcacctggatcaagatccttcttcacagagataatcgcatca
atttcagatataaagttttcaagggatggaagatatattcttagtcgtgattatatgact
ctcaagctatgggatctcaacatggattcaggccctgtttcaaccttccaggtccatgaa
catttaaggcccaggctatgtgatctgtatgagaatgactcaatatttgacaaatttgag
tgttgtcttagcggggatggacttcgtgttgcaactggttcctatggtaatttgtttcgg
gtttttggctgtactcctggaagcacagaagcaactactttggaagcaagcagaaacccc
atgaggcggcagattgtaaacccaacaaggcccacacgcacactaacctctctggcccgt
ggcgtgcgaagaggtggggagaatcaaggcgttgatgccaatggaaattcatttgacttt
tcaaccaagttgctccatcttgcatggcacccaaccgagaattctattgcatgtgctgct
gcaaatagtttgtatatgtattatgcgtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

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