KEGG   Afipia carboxidovorans OM5 (Mississippi): OCAR_6468
Entry
OCAR_6468         CDS       T00783                                 
Name
(GenBank) Fmu
  KO
K03500  16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
Organism
oca  Afipia carboxidovorans OM5 (Mississippi)
Brite
KEGG Orthology (KO) [BR:oca00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:oca03009]
    OCAR_6468
Enzymes [BR:oca01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     OCAR_6468
Ribosome biogenesis [BR:oca03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    OCAR_6468
SSDB
Motif
Pfam: Methyltr_RsmB-F Methyltransf_31 FtsJ Methyltransf_25 Ubie_methyltran MTS Cons_hypoth95 Methyltransf_5 PrmA Methyltransf_15 Methyltransf_24 Methyltr_RsmF_N PCMT Met_10
Other DBs
NCBI-ProteinID: ACI93581
Position
complement(2406253..2407554)
AA seq 433 aa
MTPAARLSAAIDVLGAIEAERIPAQNALKSWGTAHRFAGSGDRAAIAGLVFDALRRHASS
AYLMDDDSARARLLGALKLERGLDVEAIASLCNGERFAPVPLSDAERNALATRTLADAPS
DIAGDYPTWLDPHFAEAFGDDRVKEAAAMASRAPLDLRVNTLRAKREKAQAALSHLGATP
TPWSPLGLRIVLGADARNPGVHAEEIFLKGGVEVQDEGSQLAALFTQAKPGEQVVDLCAG
AGGKTLALAAMMQGKGRLLATDRDKRQLAPIHQRLSRAGVHNAEIRSPRGAEDVLADASG
KADLVVVDAPCTGTGTWRRNPDAKWRMRPGALEIRLKDQVEVLTRAASLVKPGGRLAYIT
CSVLPQENSGQIEAFLAREPGFTVMPPAEVIAALGERAAAFREAVRLSPQGLLMTPLRTG
TDGFFVSLLRKAG
NT seq 1302 nt   +upstreamnt  +downstreamnt
atgacgcccgccgcgcggctctccgccgccatcgacgttctcggcgccatcgaggccgaa
cgcatccccgcccagaacgcactgaaatcatggggcaccgcgcaccgctttgccggctcg
ggcgaccgtgccgcgattgcggggctggtgttcgacgcgctgcgccgccacgcgtcgagc
gcctatttgatggatgacgacagcgcccgcgcgcggctgctcggggcactcaagctcgaa
cgtggtctcgacgtcgaagccattgctagcctgtgcaatggtgagcgctttgcgcctgtg
ccgttgtcggatgccgagcgcaatgcgcttgcgacccgcacacttgccgatgcgccatcc
gatatcgcgggagattaccccacctggctcgatccgcattttgcggaagcctttggcgat
gatcgcgtcaaggaagcggccgcgatggcgagccgcgcgccgctcgacctgcgggtcaac
acgcttcgggccaagcgggagaaggcgcaggccgcactctcgcaccttggagccacgccg
acgccatggtcgccgctcggccttcgcatcgtgctcggggcggatgcgcgcaaccccggc
gttcatgccgaggagattttccttaaaggtggcgttgaagtgcaggatgaaggatcgcag
ctcgcggccttgttcacgcaggcaaaacccggcgagcaggtggtcgatctttgcgcgggc
gcgggcggcaaaacgctggcgctcgcggcgatgatgcagggtaagggccggctgctcgcg
accgatcgcgacaagcgccagcttgcgccgatccaccagcggctgtcgcgcgcaggggtc
cacaatgccgaaatccgctccccgcgcggggcggaggacgtgctggccgatgcttccggg
aaagccgatctcgtggtggtggacgcgccctgtaccggcaccgggacgtggcggcgcaac
cccgacgcgaaatggcggatgcggcccggcgcgctggaaatccggctcaaggatcaggtc
gaggtgctcacgcgcgcagcctcgctggtcaagcccggcgggcggctcgcctacatcacc
tgttcggtgctgccgcaggagaacagcggccagatcgaggccttcctcgcgcgcgagccg
ggctttaccgtgatgccgccggccgaggtgatcgcggcgctgggcgagcgggcggccgct
ttcagggaagccgtgcgcctgtcgccgcaggggcttctgatgaccccgctgcgcaccggc
accgacgggtttttcgtgtcgctcctgcgcaaggcgggatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (14)   
   Pfam (14)   
All databases (27)   

Download RDF
DBGET integrated database retrieval system