KEGG   Afipia carboxidovorans OM5 (Mississippi): OCAR_7604
Entry
OCAR_7604         CDS       T00783                                 
Symbol
trbJ1
Name
(GenBank) P-type conjugative transfer protein TrbJ
  KO
K20266  type IV secretion system protein TrbJ
Organism
oca  Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:oca00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    OCAR_7604 (trbJ1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:oca02044]
    OCAR_7604 (trbJ1)
Secretion system [BR:oca02044]
 Type IV secretion system
  Trb secretion system protein
   OCAR_7604 (trbJ1)
SSDB
Motif
Pfam: DUF948 Hypoth_Ymh PLU-1 LXG DUF4141 BORCS6 FapA DNA_pol_lambd_f Methyltrn_RNA_4
Other DBs
NCBI-ProteinID: ACI94704
Position
complement(3558965..3559723)
AA seq 252 aa
MMIRHSRSRAILMAATMLAAPIALSPMLATPAHALIVFDPSNYAQNVIQAARALEQITHQ
ITSLQNEAQMLINQARNLVSLPFSSLQQLQQSVQKTQQLLNQAQNIGFDVQKIDQMFAQK
YANVSMSASDRQLVADARSRWQNTVGGLQDAMRVQAGVVGNIDTNRTQISNLVSQSQGAT
GALQATQAGNQLLALQSQQLSDLVALVSANGRADALTQAERAAAAEQGREQRRRFLTPGA
GYTPGNARMFGN
NT seq 759 nt   +upstreamnt  +downstreamnt
atgatgatccgtcattcccgttcgcgcgccattctcatggccgcgaccatgcttgccgcg
cccatcgcattgtcaccgatgctggcgacgcccgctcacgccctcatcgtgttcgatccg
tcgaactatgcgcagaacgtcattcaggcggcacgggcgctggagcagatcacccatcag
atcacttcgcttcagaacgaagcgcagatgctcatcaatcaggcccgcaacctggtgagc
ctgccgttctcctcgctccagcagcttcagcagtcggtgcagaagacgcagcagcttttg
aatcaggcgcagaacatcggcttcgacgtgcagaagatcgaccagatgtttgcccaaaaa
tacgccaacgtctccatgtccgcgagcgaccggcagcttgttgctgacgcgcgctcgcgc
tggcagaacacggttggcggcttgcaggacgccatgcgcgtgcaggccggtgtcgtcggc
aacatcgacacgaaccgcacgcaaatatcgaacctcgtcagccagagccagggcgcaacg
ggcgcgctgcaagcgacgcaggcgggcaaccagttgctcgccctgcaatcgcagcagctc
tccgatctggtggcgctggtctccgccaacggccgcgccgatgcgctgacacaggccgaa
cgcgcggctgcggccgaacagggccgcgagcagcgccgccgcttcctgacgccgggcgcg
ggctacacgcccggcaacgcccgcatgttcggcaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

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