KEGG   Afipia carboxidovorans OM5 (Goettingen): OCA5_c05390
Entry
OCA5_c05390       CDS       T01617                                 
Symbol
trbJ2
Name
(GenBank) P-type conjugal transfer protein TrbJ
  KO
K20266  type IV secretion system protein TrbJ
Organism
ocg  Afipia carboxidovorans OM5 (Goettingen)
Pathway
ocg02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ocg00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    OCA5_c05390 (trbJ2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ocg02044]
    OCA5_c05390 (trbJ2)
Secretion system [BR:ocg02044]
 Type IV secretion system
  Trb secretion system protein
   OCA5_c05390 (trbJ2)
SSDB
Motif
Pfam: DUF948 Hypoth_Ymh PLU-1 LXG DUF4141 BORCS6 FapA DNA_pol_lambd_f Methyltrn_RNA_4 Mod_r
Other DBs
NCBI-ProteinID: AEI05263
UniProt: F8BWC5
Position
564713..565468
AA seq 251 aa
MIRHSRSRAILMAATMLAAPIALSPMLATPAHALIVFDPSNYAQNVIQAARALEQITHQI
TSLQNEAQMLINQARNLVSLPFSSLQQLQQSVQKTQQLLNQAQNIGFDVQKIDQMFAQKY
ANVSMSASDRQLVADARSRWQNTVGGLQDAMRVQAGVVGNIDTNRTQISNLVSQSQGATG
ALQATQAGNQLLALQSQQLSDLVALVSANGRADALTQAERAAAAEQGREQRRRFLTPGAG
YTPGNARMFGN
NT seq 756 nt   +upstreamnt  +downstreamnt
atgatccgtcattcccgttcgcgcgccattctcatggccgcgaccatgcttgccgcgccc
atcgcattgtcaccgatgctggcgacgcccgctcacgccctcatcgtgttcgatccgtcg
aactatgcgcagaacgtcattcaggcggcacgggcgctggagcagatcacccatcagatc
acttcgcttcagaacgaagcgcagatgctcatcaatcaggcccgcaacctggtgagcctg
ccgttctcctcgctccagcagcttcagcagtcggtgcagaagacgcagcagcttttgaat
caggcgcagaacatcggcttcgacgtgcagaagatcgaccagatgtttgcccaaaaatac
gccaacgtctccatgtccgcgagcgaccggcagcttgttgctgacgcgcgctcgcgctgg
cagaacacggttggcggcttgcaggacgccatgcgcgtgcaggccggtgtcgtcggcaac
atcgacacgaaccgcacgcaaatatcgaacctcgtcagccagagccagggcgcaacgggc
gcgctgcaagcgacgcaggcgggcaaccagttgctcgccctgcaatcgcagcagctctcc
gatctggtggcgctggtctccgccaacggccgcgccgatgcgctgacacaggccgaacgc
gcggctgcggccgaacagggccgcgagcagcgccgccgcttcctgacgccgggcgcgggc
tacacgcccggcaacgcccgcatgttcggcaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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