KEGG   Afipia carboxidovorans OM5 (Goettingen): OCA5_c08670
Entry
OCA5_c08670       CDS       T01617                                 
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease 7 large subunit XseA
  KO
K03601  exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Organism
ocg  Afipia carboxidovorans OM5 (Goettingen)
Pathway
ocg03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ocg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    OCA5_c08670 (xseA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ocg03400]
    OCA5_c08670 (xseA)
Enzymes [BR:ocg01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     OCA5_c08670 (xseA)
DNA repair and recombination proteins [BR:ocg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     OCA5_c08670 (xseA)
SSDB
Motif
Pfam: Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon Cytomega_UL84 RecJ_OB Gly_transporter
Other DBs
NCBI-ProteinID: AEI05589
UniProt: B6JIV7
Position
complement(921301..922761)
AA seq 486 aa
MSKDSESLSNTAEFTVSELSSALKRTVEDAYGHVRVRGEISGFRGPHASGHCYFALKDES
AKIEAVIWKGVHGRMRVKPQEGLEVIATGKLTTYPGSSKYQIVIEAIEPAGVGALMALME
ERKRKLAAEGLFDDARKQLLPWLPEVIGVVTSPTGAVIRDILHRLHDRFPRRVLVWPVRV
QGEGSAEQIAAAIEGFNALEEGGAIPRPDLLIVARGGGSLEDLWSFNEEIVVRAAAGSMI
PLISAVGHETDITLIDFAADKRAPTPTAAAEMAVPVRADLAIEISSLARRAFACWQRGHE
HRRSELRGAARGLPRLTDLLAIPRQRFDRAAAQLPRALRANTHVYDRRLSMVTGRLTVTT
LRTQIARSRDQVNRLSEIAKRCSDHFIALRRNRVQHSAQMLAALSYKSVLSRGFALVRDE
AGQPLHHAAQVGAGERISIEFADGRIAATTHGPAVPAAKNVSPARKPAKAEKAAKPEPKK
VQGDLF
NT seq 1461 nt   +upstreamnt  +downstreamnt
atgagcaaagactccgagtcgttatccaatactgcggaattcaccgtatccgagctgtcc
tccgcgctgaaacgcacggtcgaggacgcctacggccatgtccgcgtgcggggcgagatt
tccggtttccgtgggccccatgcctcgggccattgctattttgccctgaaggacgagagc
gccaagatcgaagccgtgatctggaaaggcgtccatggccggatgcgggtgaaaccgcag
gaaggccttgaggtcatcgccaccggcaagctcacgacatatcccggttcctcgaaatat
cagatcgtcatcgaggcgatcgagcctgcgggcgtcggcgcgctgatggcgctgatggag
gaacgcaagcgcaagcttgccgccgagggcctgttcgacgacgcccgcaagcagcttctg
ccgtggctgccggaggtgatcggcgtcgtcacctcgccgaccggcgccgtcatccgcgat
attctccatcgcctgcacgaccgtttcccccgccgcgtactggtgtggccggtgcgggtg
cagggcgagggttccgccgagcagatcgcagccgccattgaaggcttcaacgcgctcgag
gaaggtggcgcaattccccgccccgatcttctgatcgtcgcgcgcggcggcggctcgctc
gaagacctgtggtcgttcaacgaggaaatcgtggtgcgggcggcggcgggaagcatgatc
ccgctgatctcggcggtcgggcatgagaccgacatcacgctgatcgatttcgccgccgac
aagcgcgcgccgacaccaacggcggccgccgaaatggcggtgccggtgcgggccgatctt
gcgatcgagatttcctcgctggcgcggcgcgccttcgcctgctggcagcgcggccacgaa
catcgccgctccgaattgcgcggtgccgcgcgcggcctgccgcggctcaccgacctcctc
gcgattccgcgtcagcgtttcgaccgcgccgccgcgcaactgccccgcgcgctgcgggcc
aatacgcacgtctatgaccgtcggctgtcgatggtgacgggacggctcaccgtcaccacg
ctgcgcacgcagatcgcgcgcagtcgggatcaggtcaatcgcctgtcggaaatcgcaaag
cgttgctcggatcattttatcgcgctgcgacgcaaccgcgttcagcacagcgcgcagatg
ctggcggcgttgtcctacaagagcgtgctgtcgcgtggcttcgcgctggtgcgggatgag
gcggggcagccgttgcaccacgccgcgcaggtcggcgcgggcgaacgcatcagcatcgag
ttcgccgacggccgcatcgcagcgaccacgcacggaccggccgtgcccgcggcaaagaac
gtcagccccgcacgcaagcctgccaaggccgagaaggccgcaaagccggagccgaagaaa
gttcagggcgacttgttctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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