KEGG   Oryctolagus cuniculus (rabbit): 100339101
Entry
100339101         CDS       T03373                                 
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
  KO
K03131  transcription initiation factor TFIID subunit 6
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    100339101
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ocu03021]
    100339101
   03036 Chromosome and associated proteins [BR:ocu03036]
    100339101
Transcription machinery [BR:ocu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     100339101
   Coactivators
    SAGA/TFTC/STAGA complex
     100339101
Chromosome and associated proteins [BR:ocu03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     100339101
    STAGA complex
     100339101
    TFTC complex
     100339101
    SAGA complex
     100339101
    SLIK complex
     100339101
SSDB
Motif
Pfam: TAF6_C TAF
Other DBs
NCBI-GeneID: 100339101
NCBI-ProteinID: XP_008272582
Ensembl: ENSOCUG00000009491
Position
Unknown
AA seq 640 aa
MQSSTGAMSEREERRFVEIPRESVRLMAESTGLELSDEVAALLAEDVCYRLREATQNSSQ
FMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPAREGELYFPEDREVNLVELA
LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSSLTDDLLKYYQQVTRAVLGDDP
QLMKVALQDLQTNSKIAALLPYFVYVVSGVKSVSHDLEQLHRLLQVARSLVRNPHLCLGP
YVRSLVGSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQQILLSL
QKVLADPVRPLCSHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLDDYSVSNAQVKA
DGHKVYGAILVAVERLLKMKAQAAEPSRGGSGGRGGPGGRGGPGGRGGRRPDDLPWDSLL
LQGSPSGAGAEPGFGSGLSLPPGGAGPDDPSPSVTLADIYRELYAFFGDSLATRFGTGQP
APTAPRPPGDKKEPAAAPDSVRKMPQLTASAVVSPQGDESPRGGGGGAPSAPAPAASENR
PLPRVHRARGAPRQQGPGAGTRDVFQKSRFAPRGAPHFRFIIAGRQAGRRCRGRLFQTAF
PAPYGPSPASRYVQKLPMIGRTGRPARRWALSDYSLYLPL
NT seq 1923 nt   +upstreamnt  +downstreamnt
atgcaaagctccactggggccatgtcggagcgagaagagcggcggtttgtggagatccct
cgggagtcggtccggctcatggcagagagcaccggcctggagctgagcgacgaggtggcg
gccctgcttgcagaggatgtgtgctaccggctccgggaagcaacacagaacagctctcag
ttcatgaagcacaccaagcggcggaagctgacggttgaggacttcaacagggccctcagg
tggagcagcgtggaggctgtctgtggttatggctcccaggaggccttgcctctgcgccca
gccagggagggtgagctctactttcctgaggatcgagaggtgaacctggtggagctggct
ttggccaccaacatccccaaaggctgtgctgagacagctgtcagagttcatgtctcctac
ctggatggcaaagggaacctggccccccagggatcagtgcctagcgccgtgtcatcgctg
actgatgacctgctcaagtactatcagcaggtgactcgggctgtgctaggggatgatccc
cagctgatgaaggtggctctccaggacttgcagacgaactccaagattgcagcgctcctg
ccttactttgtttatgtggtcagtggggtgaaatctgtcagccatgacctggagcagctg
caccggctgctgcaggtggcacggagcctggtccggaacccacacctctgcctggggccc
tatgtccgctccctggtgggcagcgtcctctactgcgtcctggagcctctggctgcctcc
atcaaccccctgaatgaccactggactctgcgggacggggctgctctcctgctcagccac
atcttctggactcatggggaccttgtaagtggcctctatcagcagatcctgctctccctg
cagaaggttctggcagaccccgtgcggcctttgtgttctcactatggggccgtggtgggg
ctgcatgctcttggctggaaggcagtggagcgagtgctgtacccacacctgtccacttat
tggacaaacctgcaggctgtgctggacgattattcggtgtccaacgctcaggtcaaagca
gatgggcacaaagtctacggagccattctggtggctgtagagcggctgctgaagatgaag
gcccaggcggcggagcccagcaggggcggctccggcggcaggggcggccccggcggcagg
ggcggccccggcggcaggggcggccggcgcccggacgacctgccctgggacagcctgctc
ctgcagggctctccctccggcgctggtgcggagccaggcttcgggtctggcctctcgctg
ccgccagggggcgcggggccggacgacccttctccttccgtgaccctggccgacatctac
cgggagctctacgccttcttcggtgacagcttggccactcgcttcggcaccggccagccc
gcgcccacggccccgcggccgcccggggacaagaaggagccagcggccgccccggactct
gtgcggaagatgccgcagctgaccgccagcgcggtggttagcccccagggcgacgagagc
ccccggggcggcggaggcggcgctccgtcggccccggcgcccgccgcctccgagaacagg
ccgctgccgcgcgtgcaccgggcgcgaggggcgccccggcagcagggccccggcgcgggc
acccgcgacgtcttccagaagagccgtttcgccccgcgcggcgccccgcactttcggttc
atcatcgccgggcggcaggccgggaggcgctgccgggggcgcctcttccagactgccttc
cccgcgccgtacgggcccagcccggcctctcgctacgtgcagaagctgcccatgatcggc
cgcaccggccggccggcccgccgctgggcgctgtcggactactcgctgtacctgcccctc
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (2)   
   Pfam (2)   
All databases (31)   

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