KEGG   Oryctolagus cuniculus (rabbit): 100347902
Entry
100347902         CDS       T03373                                 
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 5 isoform X1
  KO
K11836  ubiquitin carboxyl-terminal hydrolase 5/13 [EC:3.4.19.12]
Organism
ocu  Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ocu01002]
    100347902
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ocu04121]
    100347902
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ocu04147]
    100347902
Enzymes [BR:ocu01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     100347902
Peptidases and inhibitors [BR:ocu01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   100347902
Ubiquitin system [BR:ocu04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    100347902
Exosome [BR:ocu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100347902
SSDB
Motif
Pfam: UCH zf-UBP_var UBA zf-UBP UCH_1 UBA_4 UBA_3
Other DBs
NCBI-GeneID: 100347902
NCBI-ProteinID: XP_002712955
Ensembl: ENSOCUG00000003582
UniProt: G1SK00
Position
8:complement(78755231..78769486)
AA seq 858 aa
MAELSEEALLSVLPTIRVPKAGDRVHKDECAFSFDTPESEGGLYICMNTFLGFGKQYVER
HFNKTGQRVYLHLRRTRHPREEDTTAGTGDPPRKKPTRLAIGMEGGFDLTEEKFEYDEDV
KIVILPDYLEIARDGLGGLPDIVRDRVTSAVEALLSADSASRKQEVQAWDGEVRQVSKHA
FNLKQLDNPARIPPCGWKCSKCDMRENLWLNLTDGSILCGRRYFDGSGGNNHAVEHYRET
GYPLAVKLGTITPDGADVYSYDEDDMVLDPSLAEHLSHFGIDMLKMQKTDKTMTELEIDM
NQRIGEWELIQESGVPLKPLFGPGYTGIRNLGNSCYLNSVVQVLFSIPDFQRKYVDKLEK
IFQNAPTDPTQDFSTQVAKLGHGLLSGEYSKPAPESGDGEQAPEQKEVQDGIAPRMFKAL
IGKGHPEFSTNRQQDAQEFFLHLINMVERNCRSSENPNEVFRFLVEEKIKCLATEKVKYT
QRVDYIMQLPVPMDAALNKEELVEYEEKKRQAEEEKMPLPELVRAQVPFSSCLEAYGAPE
QVDDFWSTALQAKSVAVKTTRFASFPDYLVIQIKKFTFGLDWVPKKLDVSIEMPEELDIS
QLRGAGLQPGEEELPDIAPPLVTPDEPKGSLGFYGNEDEDSFCSPHLSSPTSPMLDESVI
IQLVEMGFPMDACRKAVYYTGNSGAEAAMNWVMSHMDDPDFANPLILPGSSGPGSTSAAA
EPPPEDCVTTIVSMGFSRDQALKALRATNNSLERAVDWIFSHIDDLDAEAAMDISEGRSA
ADSISESVPVGPKVRDGPGKYQLFAFISHMGTSTMCGHYVCHIKKEGRWVIYNDQKVCAS
EKPPKDLGYIYFYQRVAS
NT seq 2577 nt   +upstreamnt  +downstreamnt
atggcggagctgagtgaggaggcgctgctgtcagtattaccgacgatccgggtccctaag
gcgggagaccgggtccacaaagacgaatgcgccttctccttcgacacgccggagtctgag
ggcggcctctacatctgcatgaacactttcctgggcttcgggaagcagtatgtggaaaga
cacttcaacaagacaggccagagagtctacctgcacctgcggcggactcggcatccgaga
gaagaggatactactgcaggcacgggcgacccgccccgcaagaagcccaccaggctggct
atcggtatggaaggcggctttgacctcactgaagagaagtttgagtacgatgaggatgtg
aagatcgtcattttgcccgattacctggagatcgcccgggatgggctgggggggctgcct
gacatcgtcagagaccgggtgaccagcgcggtggaggccctgctgtcggctgactcagcc
tcccgcaaacaggaggtgcaggcatgggatggggaagtccggcaggtgtccaagcatgcc
ttcaacctcaagcagctggacaaccctgcccgcattcccccctgtggctggaaatgctcc
aagtgtgacatgagagagaacctgtggctcaacctgacagatggctccatcctctgcggc
cggcgctacttcgatggcagtgggggcaataaccacgccgtggagcactacagggagaca
ggctacccgttagctgtcaagcttggcaccatcacaccagacggggctgatgtgtactca
tatgacgaagatgacatggtcctggaccccagcctggccgagcacctctcacacttcggc
atcgacatgctgaagatgcagaagacggacaagacgatgacagagttggagatagacatg
aaccagcggattggcgagtgggagctgatccaggagtcgggagtaccactgaagcccctg
ttcgggcccggctacacaggcatccggaacctgggcaacagctgctacctcaactctgtg
gtgcaggtgctcttcagcatccccgacttccagaggaagtacgtggataagctggagaag
atcttccagaacgccccgacggaccccacccaggacttcagcacccaggtggccaagctg
ggccatgggctcctctcgggggagtattccaagccagccccagagtcgggggatggggag
caggcgccagaacaaaaggaagtccaagacggcatcgcccctcggatgtttaaggccctc
attggcaagggccaccctgagttctccaccaaccggcagcaggacgcccaggagttcttc
ctgcacctcatcaacatggtggagaggaattgccggagctccgaaaatcctaatgaagtg
ttccgcttcttggtggaggaaaagatcaagtgcctggccacagagaaggtgaagtacacc
cagcgagtggactacatcatgcagctgcctgtgcccatggatgcagcccttaacaaagag
gagcttgtggagtatgaggagaagaagcggcaggccgaggaggagaagatgcccctgccg
gagctggttcgggcccaggtgcccttcagctcctgcctggaggcctatggggcccctgag
caggtggatgacttctggagtacagccctgcaggccaaatcggtagctgtcaagaccaca
cggttcgcctcattccctgactacctggtcatccagatcaagaagttcacctttggcctg
gactgggtgcccaagaaactggatgtgtccattgagatgccagaggagctggacatctct
cagctgaggggcgccgggctgcagccgggagaggaggagctgcctgacattgccccgccc
ctggtcacgccggatgagcccaaaggtagccttggtttctatggcaacgaagacgaagac
tccttctgctcccctcacctctcctctccgacatcgcccatgctggatgaatcggtcatc
atccagctggtggaaatgggctttcccatggacgcctgccgcaaagccgtctactacacg
ggcaacagtggggccgaggctgccatgaactgggtcatgtcgcacatggacgatccagat
tttgcaaatcccctcatcctgcctggctccagtgggcctggctccacaagtgcagcagcc
gagcccccaccggaggactgtgtgaccaccatcgtctccatgggcttttcccgggaccag
gccctgaaagccctgcgggccacgaacaacagtttagagcgggctgtggactggatcttc
agtcacattgacgacctggatgccgaagccgccatggacatctcagagggccgttcagct
gctgactccatctctgagtctgtgccagtgggacctaaagtccgggacgggcctggaaag
tatcagctctttgccttcattagtcacatgggcacctccaccatgtgtggtcactacgtc
tgccacatcaagaaggaaggcagatgggtgatctacaacgaccagaaagtgtgtgcctcc
gagaagccgcctaaggacctgggctacatctacttctaccagagagtggccagctaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (7)   
   Pfam (7)   
All databases (40)   

Download RDF
DBGET integrated database retrieval system