KEGG   Oryctolagus cuniculus (rabbit): 100350728
Entry
100350728         CDS       T03373                                 
Name
(RefSeq) CCR4-NOT transcription complex subunit 8
  KO
K12581  CCR4-NOT transcription complex subunit 7/8
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100350728
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocu03019]
    100350728
Messenger RNA biogenesis [BR:ocu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100350728
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     100350728
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 100350728
NCBI-ProteinID: XP_008253520
Ensembl: ENSOCUG00000027257
UniProt: A0A5F9DAZ9
Position
3:36135687..36155307
AA seq 292 aa
MPAALVENSQVICEVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGEFRSSIDY
QYQLLRCNVDLLKIIQLGLTFTNEKGEYPSGINTWQFNFKFNLTEDMYSQDSIDLLANSG
LQFQKHEEEGIDTLHFAELLMTSGVVLCDNVKWLSFHSGYDFGYMVKLLTDSRLPEEEHE
FFHILNLFFPSIYDVKYLMKSCKNLKGGLQEVADQLDLQRIGRQHQAGSDSLLTGMAFFR
MKELFFEDSIDDAKYCGRLYGLGTGVAQKQNEDVDSAQEKMSILAIINNMQQ
NT seq 879 nt   +upstreamnt  +downstreamnt
atgccggcagcacttgtggagaacagccaggttatctgtgaagtctgggccagcaatctg
gaggaagagatgcggaagatccgagaaattgtgctcagttacagttatattgccatggac
acagaatttccaggtgttgtcgtgcgtccaattggtgaatttcgtagttccatagattac
cagtatcagcttctgcggtgcaatgttgaccttttaaaaatcatccagctgggccttacg
ttcacaaatgagaagggagaatatccttccggaatcaacacttggcagtttaacttcaaa
ttcaaccttacagaggacatgtactcccaggactccatagacctccttgctaactcagga
ctgcagtttcagaagcatgaagaggaagggattgacacactgcactttgcggagctgctt
atgacctcaggagtggttctgtgtgacaatgtcaaatggctgtcgtttcacagtggctat
gactttggctacatggtgaagttgctcacagattcccgtttaccagaagaagagcatgaa
ttctttcatattctgaaccttttcttcccttccatttatgatgtgaaataccttatgaag
agttgcaaaaaccttaagggaggtcttcaggaagttgcggatcagctggatttgcagagg
attggaaggcagcaccaggctggctcagactcgctgctgacaggcatggcgttcttcagg
atgaaagagctgttttttgaggacagtattgatgatgccaagtactgtgggcggctctat
ggcctaggcacgggtgtggcccagaagcagaatgaggatgtggactctgcccaggagaag
atgagcatcttggcgattatcaacaacatgcagcagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (1)   
   Pfam (1)   
All databases (26)   

Download RDF
DBGET integrated database retrieval system