KEGG   Oryctolagus cuniculus (rabbit): 100358904
Entry
100358904         CDS       T03373                                 
Name
(RefSeq) LOW QUALITY PROTEIN: nucleosome-remodeling factor subunit BPTF
  KO
K11728  nucleosome-remodeling factor subunit BPTF
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    100358904
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ocu03036]
    100358904
Chromosome and associated proteins [BR:ocu03036]
 Eukaryotic type
  Chromatin remodeling factors
   NuRF complex
    100358904
   NuRF complex (fruit fly)
    100358904
SSDB
Motif
Pfam: Bromodomain DDT PHD WSD WHIM1 PHD_5
Other DBs
NCBI-GeneID: 100358904
NCBI-ProteinID: XP_008269950
Ensembl: ENSOCUG00000015866
Position
19:complement(47138638..47271030)
AA seq 3016 aa
MRGRRGRPPKQPAAPAAERCAPAPPPPPPPPPTSGPIGGLRSRHRGSSRGRWAAAQAEVA
PKTRLSSPRGGSSSRRKPPPPPXPPPSTSAPGRGGRGGGGGRTGGGGGGGHLARTTPARR
AVNKVVYDDHESEEEEEEEDMVSEEEEEEEEDGDAEETQDSEDDEEDEMEEDDDDSDYPE
EMEDDDDDASYCTESSFRSHSTYSSTPGRRKPRAHRPRSPILEEKDIPPLEFPKSSEDLM
VPNEHIMNVIAIYEVLRNFGTVLRLSPFRFEDFCAALVSQEQCTLMAEMHVVLLKAVLRE
EDTSNTTFGPADLKDSVNSTLYFIDGMTWPEVLRVYCESDKEYHHVLPYQEAEDYPYGPV
ENKIKVLQFLVDQFLTTNIAREELMSEGVIQYDDHCRVCHKLGDLLCCETCSAVYHLECV
KPPLEEVPEDEWQCEVCVAHKVPGVTDCVAEIQKNKPYIRHEPIGYDRSRRKYWFLNRRL
IIEEDTENENEKKIWYYSTKVQLAELIDSLDKDYWEAELCKILEEMREEIHRHMDITEDL
TNKARGSNKSFLAAANEEILESIRAKKGEADDVKSPEEIEKDKNETENSNCKDAERSREE
ADDQSLDRDNDSKMPDAPEQGKPEEPTEVGDKGNSVSANLGDNTTNASSEETSPCEGRSP
LGCLPETHDSSNMAEKKVASELPHDVPEEPNKTCDSSNTSATTTSIQPNLENSNSSSELN
SSQSESAQAADDPENGERESHTPVSIQEEIGDFKLEKSNGELSESPGAGRGASGSTRIIT
RLRNPDSKLSQLKSQQVAAAAHEANKLFKEGKEVLVVNSQGEISRLSTKKEVVMKGNINN
YFKLGQEGKYRVYHNQYSTNSFALNKHQHREDHDKRRHLAHKFCLTPAGEFKWNGSVHGS
KVLTISTLRLTITQLENNIPSSFLHPNWASHRANWIKAVQMCSKPREFALALAILECAVK
PVVMLPIWRESLGHTRLHRMTSIEREEKEKVKKKEKKQEEEETMQQATWVKYTFPVKHQV
WKQKGEEYRVTGYGGWSWISKTHVYRFVPKLPGNTNVNYRKSVEGTNNSMDENMDESDKR
KSPRSPKKIKTEPDSAKGEVKDSDSAQGAAQSEMDVSRSAEKDQDVKELLDSDHNKSFKE
EPMEIDDDVKTESHVNCQESSPVDVVNVSEGFHLRTSYKKKAKSSKLDGLLERRIKQFTL
EEKQRLEKMKLEGGIKSVGKSPTSSLKSLSESPVTTTKEGCQSDLVRQEQSPHASNEKSE
DLTQGCSESDSSVLETGDPGHTTNKLYPKEQALADVSIQSPGTDCQKQNSVENDIDESLP
EAASKGQEPSKIKTKGSGFFIDDAKLVSANYVGTLVCKNKKALLQEDNDAVSPSKSGLLP
SAPRSTKAVDLEGKLGCDSECSSTLENSSDTMSVQDSIEEDMVVQNSKEGISEQFRTQEQ
GVEGLEPLQCQFVSGKSPGNGDDRLQDKVTEANGKKTSQQKKLEERPVNKYIDQLNLKNT
TDKKNNENKESEKKGQKAGALQVNGKDKAKVHLKSECLKDLSESKLVSGNVEPKVNNINK
TIPENDIKSLTVKESAVKPFINGDVIMEDFNEKINSETKSRSPSSSDAEGNYQESLGTLP
STKECDSTQTATPPPSYSENTSANQMEDMEVETSEVKKATPSPMTSGEESNLSNDFVDGN
VNGDSQRKTVITEVTTMTSTVATESKTVIQVAKGDKQTVVSSTENCAKSTVTTTTTTVTK
LSTPSTGSSVDIISVKEQSKTVVTTTVTDSLTTAGGTLVTSMTVSKEYSTRDKVKLMKFS
RPKKTRSGTALPSYRKFVTKSSKKSIFVLPNDDLKKLARKGGIREVPYFNYNAKPALDIW
PYPSPRPTFGITWRYRLQTVKSLAGVSLMLRLLWASLRWDDMAAKAPPGGGTTRTETSET
EITTTEIIKRRDVGPYGIRSEYCVRKIICPIGVPEAPKETPTPQRKGLRSSALRPKRPET
PKQTGPVIIETWVAEEELELWEIRAFAERVEKEKAQAVEQQAKKRLEQQKPTVIAAASTS
PANSTTSTISPAQKVMVAPISGSVTTGTKMVLTTKVGSPATVTFQQNKNFHQTFATWVKQ
GQSNSGVVQVQQKVLGIIPSSTGASQQTFTSFQPRAATVTIRPNTSGSAGATGTSQVITG
PQIRPGMTVIRTPLQQSTLGKAIIRTPVMVQPGAPQQVVTQIIRGQPVSTAVSAPSTVSS
TPGPKTLTSGASTASVQSTASPAPRPQQGQVKLTMAQLTQLTQGHGGNQGLTVVIQGQGQ
TTGQLQLIPQGVTVLPGPGQQLMQAAMPNGTVQRFLFTPLATTATTASTTTTTTVSTTAA
GTGEQKQSKLSPQTQVQQAQTLPPSQSPSVSPAGAQPQTAPPPAQPPPPPPPQSPAQPEV
QAQPEVQTQTTVASQVPSEAQPTQAQSSQPQGTAQCPPPSTVQGQSPVRVQSPPQTRVRP
STPSQVSPGQQPQVQTPTSQPIPIQPHTSLQIPSQGQPQSQPQVQSSTPTLSSAQALNQV
TVSSPSRPQLQIPQPQPQVLAVPPPQQQVQVVAQIQAQQGGVPQQIKLQLPVQVQPSTAV
QAHHIQNVVTVQAASVQEQLQRVQQLRDQQQKKKQQQIEIKREHTLQASNQSEIIQKQVV
MKHNAVIEHLKQKKTMTPAEREENQRMIVCNQVMKYILDKIDKEEKQAAKKRKREESVEQ
KRSKQNATKLSALLFKHKEQLKAEILKKRALLDKDLQIEVQEELKRDLKIKKEKDVMQAV
QATAVAAPPAPVAAAPPAPPPSPPPAPSLQHPGLLSTPTLPAASQKRKREEEKDSGSKSK
KKKMISTTSKETKKDTKLYCICKTPYDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEY
VCPQCQSTEDAMTVLTPLTEKDYEGLKRVLRSLQAHKMAWPFLEPVDPNDAPDYYGVIKE
PMDLATMEERIQRRYYEKLTEFVADMTKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKG
FKASRSHNNKLQSTAS
NT seq 9051 nt   +upstreamnt  +downstreamnt
atgaggggccggcggggcaggccgcccaagcagcccgcggctcccgctgcggagcgctgc
gccccggccccgccgccgccgccgccgccgccgcccacgtccggacccatcggggggctc
cgctcgcggcaccgcggcagcagccggggcaggtgggccgccgcccaggctgaggtggcg
cccaagacgcggctgagctcgccccgggggggcagcagtagccggaggaagccgccgccg
ccgccgnngcccccccccagcaccagcgccccgggccggggggggcgaggaggcgggggc
ggcaggacggggggcgggggcggcggcggccacctggcccggaccaccccggcccggagg
gcggtcaacaaagtggtgtacgatgaccacgagagcgaggaggaggaggaggaggaggac
atggtctctgaggaagaggaggaggaggaggaggacggcgacgccgaggagacccaggat
tcggaggacgacgaggaagatgagatggaggaggacgacgatgactccgattatccggag
gagatggaagacgacgacgacgacgccagttactgcacggagagcagcttcaggagccat
agcacctacagcagcactccaggtaggcggaaaccaagagcacaccggccccgttctcca
atattggaagaaaaagatatcccgccccttgaatttcccaagtcctctgaggatttaatg
gtgcctaatgagcatataatgaatgttattgccatttacgaggtactgcggaactttggc
actgtgctaaggttgtctccttttcgctttgaggacttctgtgcagccctggtgagccaa
gagcagtgcacgctcatggctgagatgcacgtcgtgcttctgaaagcagttctgcgtgaa
gaagacacttccaacaccacctttgggcctgctgacctgaaagacagtgtgaattccacg
ctgtatttcatagacgggatgacgtggcctgaggtgctgcgggtgtactgtgagagcgat
aaggagtaccatcacgtgcttccctaccaggaggcggaggactacccctacggaccagtc
gagaacaagatcaaagtcctgcagttcttagttgaccagtttcttacgacaaatattgct
cgggaggaactgatgtctgaaggagtgatccagtatgatgaccattgtagggtttgccac
aaacttggggatttgctctgctgcgagacgtgctctgcagtataccatttggaatgcgtg
aagccgcctcttgaggaggtgccagaggacgagtggcagtgtgaagtctgtgtagcacac
aaggtgcctggtgtgactgactgtgttgctgaaatccaaaaaaacaaaccgtacattcga
catgagcccattggatatgaccgcagtcggaggaaatactggttcttaaaccgaagactc
ataatagaagaagacacagaaaatgaaaatgaaaagaaaatttggtactacagtacaaag
gttcagctcgcagaattaatcgactctctagacaaagattattgggaagcagaactttgc
aaaattctagaagaaatgcgtgaggaaatccatcggcacatggacataactgaagatctg
accaataaggctcggggcagtaacaaatcctttctggcggcagctaatgaagaaattttg
gaatccataagagccaaaaagggagaagctgatgatgttaaaagcccagaagaaattgaa
aaagacaagaatgagactgagaatagtaattgtaaagatgctgagagaagcagagaagag
gctgacgaccagtcccttgacagagacaatgacagcaagatgccggacgctcctgagcaa
ggaaaacctgaggagccaacagaagttggggataaaggtaactctgtgtcagcaaatctt
ggcgacaacacaacaaatgcttcttcagaagagactagtccctgtgaagggaggagcccc
ctgggctgtctcccagaaacccatgatagcagcaacatggcagagaagaaggtggcctct
gagctcccccacgatgtgccagaagaacctaacaagacatgtgacagcagtaacactagt
gctaccactacctccatccagcctaatctggaaaacagtaacagcagcagtgaactaaat
tcttcccagagtgaatctgctcaggcagctgatgatcctgaaaatggagaaagagaatcc
catacacctgtctctattcaagaagagataggtgacttcaaattggagaagtctaacggg
gagctcagtgagtctcctggagctggaagaggagcatctggctcaactcgcatcatcacc
agattgcggaacccagatagcaagcttagtcagctgaagagccagcaggtggcagccgca
gctcatgaggcaaataaattatttaaggagggcaaagaggtacttgtagttaactctcaa
ggagaaatttctcggttgagcaccaaaaaagaagtggtcatgaaaggaaatatcaacaat
tattttaaactgggtcaagaagggaagtatcgcgtctaccacaatcagtactccaccaat
tcgtttgctttgaataaacaccagcacagagaagatcatgacaagagaaggcatcttgca
cataagttctgtctgactccagcaggagagttcaagtggaatggctctgtccatgggtcc
aaagtcctcaccatatctaccctgagattgactatcacccagttagaaaacaacatccct
tcttcctttcttcaccccaactgggcttcacacagggcaaattggatcaaggcagttcag
atgtgtagcaaacccagagagtttgcactggcattagccattttggagtgtgcagttaaa
cctgttgtaatgctaccaatatggcgggagtctttagggcataccagattgcacaggatg
acatcaattgaaagagaagaaaaggaaaaagtcaaaaaaaaggagaaaaaacaagaagag
gaagaaacaatgcagcaggccacatgggtaaaatacacatttccagttaaacatcaggtt
tggaagcaaaaaggagaagaatacagagtgacaggatatggtggttggagctggattagt
aaaactcatgtgtataggtttgttcctaaactgccaggcaataccaatgtgaattacaga
aagtcagtagaaggaaccaataatagtatggatgaaaatatggatgagtcagataaaagg
aaaagtccacggagtcccaaaaaaataaaaacagaacctgattctgcgaaaggtgaggtg
aaagattcagactctgcacaaggagcagcccagagtgagatggacgtctccaggagtgcc
gagaaggaccaagatgtaaaagaacttttagattctgaccataataaatccttcaaggaa
gaaccaatggaaatagatgatgatgtgaaaacagaatcccatgtaaattgtcaggaaagt
tctccagtagatgtggtcaatgtcagtgagggttttcatctaaggactagttacaaaaag
aaagcaaagtcatctaaactagacggacttcttgaaaggagaattaaacaatttacactg
gaagaaaaacagcgccttgaaaaaatgaagttggagggtggaattaaaagtgtggggaaa
tcgcctacaagttctttgaaaagtctttctgaatcaccagtaacaacaacaaaagaaggg
tgtcagagtgacttggttaggcaggagcaaagcccccatgcaagtaatgagaaatctgag
gacttgactcagggatgttcagaaagtgattcctcggtccttgaaactggtgatcctggt
cacaccacaaacaaactttacccaaaagagcaagcgttagctgatgtctccatacagagc
ccagggacagactgtcagaaacagaattctgttgaaaatgacatagacgagagtctcccg
gaagctgccagtaaggggcaggaacccagtaagatcaaaaccaaaggaagtggttttttc
attgatgacgctaaattagtcagtgcaaattacgttggtaccttggtttgtaagaacaaa
aaagctctcttgcaggaggataatgacgccgtttctccttccaagagcggtttacttccc
tcagcgcccagaagcacaaaagccgtggacttggaaggaaagttgggctgtgactcggaa
tgtagtagcactttggaaaatagttctgatactatgtctgttcaggatagcattgaggaa
gacatggttgttcagaatagcaaagaaggtatttctgaacagttcagaactcaagaacaa
ggtgtggaaggcttggagccattgcagtgtcagtttgtttctggtaagtcccctggaaac
ggtgatgacaggctgcaggataaggtcactgaagctaatggtaaaaaaacaagtcagcag
aaaaagttagaggagagaccagttaataaatatattgatcaactaaatctcaaaaacacc
actgacaaaaagaataatgaaaacaaagagtctgaaaagaaaggacagaaggcaggcgct
cttcaggtaaatggaaaagataaagcaaaagtgcatttgaaaagtgaatgtttgaaagat
ctctctgagagcaaactagtgagtggtaatgttgaaccaaaggttaataatataaataaa
acaatccctgaaaatgacattaagtctttgactgttaaagaatctgctgtaaagccattc
attaatggtgatgtcatcatggaagattttaatgaaaaaatcaactcagaaacaaaatca
cggtcgccaagttcttctgatgctgaaggtaactaccaagaaagcttggggaccctgccg
tcaaccaaagaatgtgacagtacgcagactgccacacctccaccatcttactcagaaaat
acttcagcaaatcagatggaagatatggaagttgaaacctccgaagttaagaaggctact
ccatcacccatgacttctggagaggaatctaatctcagtaatgactttgttgatggaaac
gtcaatggagactctcaaagaaaaaccgtcatcacagaagtgaccacgatgacatccaca
gtggccacagaatcaaaaactgtcatccaagtagcaaaaggcgataagcaaactgtggtc
tcttccacagagaattgtgccaagtccactgtcacgaccacgacgacaactgtgacaaag
ctttccacaccctccacaggcagcagcgtggacatcatctctgtaaaggagcagagcaaa
actgtggtcaccacgacagtgacagactccctgaccactgcaggaggcacactggtaacg
tccatgactgtgagcaaagagtactccacaagagacaaagtgaaactgatgaaattttca
agacccaagaagacgcgttcaggtacagctctgccatcctatagaaagtttgttaccaag
agcagcaagaagagcatatttgttttgcctaatgatgacttaaaaaagttggccagaaaa
ggaggaatccgagaagtcccttattttaattacaatgcaaaacctgccttggatatttgg
ccatacccttctcctagaccaacctttggtatcacttggaggtatagacttcagactgtg
aagtccttagctggagtgagcctgatgttacggttactgtgggcaagcttgagatgggat
gacatggcagccaaggctcctccagggggagggactacccggacagaaacttctgaaact
gaaatcacaacaacagaaataattaagaggcgagatgttggtccgtatggcattcggtct
gaatattgtgtcaggaaaatcatttgccccattggagttcctgaagcacccaaagaaaca
cctacacctcagaggaaagggcttcggtctagtgcattgcggccaaagagaccagagaca
cccaagcaaacaggccctgtcattattgaaacctgggtggcagaggaagagttggagtta
tgggagatcagggcctttgctgagagagtggagaaagagaaagcacaagcagttgagcag
caggctaagaaacgtttggagcagcagaaacctaccgtcattgctgctgccagcacttcc
ccagcaaacagtacgaccagtaccatctctccagcccagaaagtcatggtggctcccata
agtggctcagtcaccactggaactaaaatggtactgactactaaggttggatctccagct
actgtaacattccagcagaacaagaacttccatcagacctttgctacctgggttaagcaa
ggccagtctaattcaggcgttgttcaagtgcagcagaaggtcctgggtatcatcccgtcg
agcacgggggcgagtcaacagaccttcacttcgttccagccccgggcagccaccgtcacc
atcaggcccaacacctccggctctgcgggagccacgggcacgtcccaggtaatcacaggg
cctcagatccgccccggaatgacggtgatcaggaccccactgcagcagtcaacactaggg
aaagcgattatccggacacctgtgatggtccagccaggtgctccgcagcaggtggtgacg
cagatcatcaggggccagcccgtttccaccgcagtctctgcccccagcacggtctcctcg
acgcctgggccgaagaccttaacctcaggagcgtccactgccagtgtacagtctacagcc
tccccggcccctcgcccccagcaaggacaggtgaagcttaccatggctcagctcacccag
ttaacacagggccatggtggcaatcaaggtttgacagtagtaattcaaggacaaggtcaa
actacgggacagctgcagctgatacctcaaggggtgactgtcctccccggcccaggacag
cagctcatgcaagctgccatgcccaatgggaccgtccagcgattcctctttacccctctg
gcaacgacagccacgacggccagtaccaccaccaccaccactgtttccaccacagcagca
ggtacaggtgaacaaaaacagagtaaattatcaccccagacccaggtgcagcaagcccaa
accctgccaccatctcagtcaccaagtgtgagtcctgcaggagcccagccacagactgct
ccgcctccagctcagcccccgcccccgcccccgccccagtcccccgctcagcctgaggtt
caggctcagcctgaagttcagacccaaacaactgttgcgtcccaggtcccttctgaagca
cagcccacccaagcacagtcatcccaaccccaagggacagcacagtgtccgcctccgagt
actgtccaaggacagtctcctgttcgtgtccagagtccaccacagactcgagtacgtcca
tcaactccatcccaggtgtctcctggacagcagccccaggttcagactccaacctcacaa
ccgattccaattcaaccacatacatctcttcagataccttcccaaggccagccacagtca
cagccccaggtacagtcttcaactccaactctttcatcagcacaagcgttaaatcaagtt
actgtctcatccccatcccgccctcagctgcagataccgcagccacagccccaagtcctt
gctgtgccgcctccgcagcagcaggtgcaggtggtggctcagatacaggctcagcaaggt
ggtgtgccccagcagatcaaactccagttacctgttcaagttcagccgagcaccgctgtg
caggctcaccacattcagaatgtggtgacagtgcaggcagccagtgtgcaagagcagttg
caaagggttcagcaactcagggatcagcagcaaaagaagaaacagcaacagatagaaatt
aagcgggaacacaccctccaagcttctaaccaaagtgaaatcattcagaaacaggtggtg
atgaagcataatgctgtcatagaacatttaaaacagaaaaagaccatgactccagctgaa
agagaagagaatcaaagaatgattgtgtgtaaccaggtgatgaagtacattttggataag
atagataaagaagaaaaacaggcagcaaaaaagcggaagcgcgaggagagcgtggaacag
aaacgtagcaaacagaacgccaccaagctctcagctctgctcttcaaacacaaagagcag
ctcaaagccgagattctgaaaaagagagcgctcctggacaaggatctccagatcgaagtg
caggaagagctgaagagagacctgaaaattaagaaagagaaggacgtgatgcaggcagtg
caggccactgcggtagctgcacccccagccccagtggcagcagctccaccagcccctccg
ccttcgcctccccctgcacccagcctgcagcacccaggcctcctgtccacgcctacctta
cctgcagcttcccagaagaggaagcgggaagaggagaaagactcaggctcaaagtccaag
aagaagaaaatgatctctactacctcaaaggaaactaagaaggacacaaagctttactgt
atctgtaaaacgccttacgatgagtctaaattttatattggctgtgatcggtgtcagaac
tggtaccatgggcgctgcgtgggcatcttgcagagtgaggcagagctcattgatgagtat
gtctgtccacagtgccagtcgacagaggatgccatgacagtgctcacgccactcaccgag
aaggactatgagggcttgaaaagggtgctgcgctccttacaggcccataagatggcctgg
cctttcctggaaccagtggaccctaatgatgcacctgattattacggtgtcattaaggaa
cctatggaccttgccaccatggaagaaagaatacaaagacgatattatgaaaagctgacg
gaatttgtggcggatatgaccaaaatttttgataactgccgttactacaatcccagtgac
tcccctttttaccagtgtgcagaggttcttgagtcattctttgtacagaaactgaaagga
ttcaaggccagcaggtctcataacaacaaactgcagtctacagcttcttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (73)   
   KEGG ORTHOLOGY (1)   
   RefGene (68)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (89)   

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