KEGG   Orrella dioscoreae: ODI_R4108
Entry
ODI_R4108         CDS       T05133                                 
Name
(GenBank) Helicase PriA essential for oriC/DnaA-independent DNA replication
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
odi  Orrella dioscoreae
Pathway
odi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:odi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    ODI_R4108
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:odi03400]
    ODI_R4108
Enzymes [BR:odi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     ODI_R4108
DNA repair and recombination proteins [BR:odi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     ODI_R4108
SSDB
Motif
Pfam: PriA_3primeBD DEAD PriA_C ResIII Helicase_C AAA_30 PriA_CRR AAA_16 AAA_22 zf-IS66
Other DBs
NCBI-ProteinID: SOE52356
UniProt: A0A1C3K5H4
Position
I:complement(4511116..4513176)
AA seq 686 aa
MVPPAAWVRVVLDVPLPGPFDYRHVAPVEPGTRVIVPFGRRKLIGVVVDNPAEPGYEPSQ
IKDVEQVLDDLPPLSERWMRLARFAADYYQRPLGEVMLPALPGPLRKVSAYQGKRASGGP
VARQARRKRTARDDAAADQPPTLNEAQQAAVDAIVGAPAFHAFLLHGVTGSGKTEVYLRA
AEQVLARGRQVLMLVPEINLTPQFEAALRARLERVAGADGLAVLHSGLSEGERLQAWTRA
VDGRARIVLGTRLAVFAPLEDLGLIVVDEEHDTSYKQQDGLRYSARDLAVWRGRDAAAAV
VLGSATPALETWYHATRGHYTRLGLPTRARAASLPAVRLVDTRRLPMENGMSPQLLDGIA
DRLARGEQSLVFLNRRGYSPALHCASCGWVSQCTRCTAFTVLHRGSHGMHRLQCHHCGYQ
ARVPRACPDCGDQDLKPMGRGTQRVEEYLAEKFPAARISRIDADSTRRKGSAQALFAQVH
AGEVDILVGTQMVAKGHDFANLTLVGVLNADSMLFSQDFRAPERLFAQLMQVSGRAGRHG
GQGEVLIQTGYPEQSVYQSLLRHDYEGFARHALAERESVGLPPYAFQALLSAEARELAQA
IDFLQRARDEAENVLAEAGLPGGVTLYDPVPLRVVRVANVERAQLLLESASRPALLAFLR
RWVGVLPALAADGRARWLLEVDPLEI
NT seq 2061 nt   +upstreamnt  +downstreamnt
atggtgccgcccgcggcgtgggtgcgcgtggtgctggatgtgcccttgccggggccgttc
gattaccgccatgtggcgccggtcgagccggggacgcgggtgatcgtgcctttcgggcgg
cgcaaactgatcggcgtggtggtggacaatccggctgaaccgggatacgagcccagccag
atcaaggatgtggagcaggtgctggacgacctgccgccgctgtccgagcgctggatgcgc
ctggcgcggttcgcggcggattattaccagcgcccgctgggcgaggtcatgctgccggcc
ttgccgggaccgctgcgcaaggtctcggcctaccagggcaagcgggcctcgggcgggccg
gtggcgcgccaggccaggcgcaagcgcacggcgcgcgacgatgccgcggctgaccagccg
cccacgctgaacgaggcgcagcaggcggcggtggatgccatcgtcggcgcgccggccttc
cacgccttcctgctgcacggcgtcaccggcagcggcaagaccgaggtctacctgcgcgcc
gccgaacaggtgctggcgcgcggccgccaggtgctgatgctggtgccggaaatcaacctg
acgccgcagttcgaggctgccttgcgggcgcgcctcgaacgggtcgcaggcgcggacgga
ctggccgtgctgcacagcggcctgtcggagggcgagcgcttgcaggcgtggacgcgggcg
gtcgatgggcgtgcgcgcatcgtgctgggcacgcgcctggctgtgtttgcgccgctggaa
gacctgggcctcatcgtcgtggacgaagagcacgacacctcgtacaagcagcaggacggc
ctgcgctattccgcgcgcgacctggccgtctggcgcggccgcgatgcggctgccgccgtc
gtgctgggctcggccacgcccgcgctggagacctggtatcacgccacgcgcggccactac
acgcggctcggcctgccgacgcgcgcgcgcgcggccagcctgccggcggtcaggctggtg
gatacgcgccggctgccgatggaaaacggcatgtcgccgcaactgctggatggcattgcc
gaccgcctggcgcgcggcgagcaatcgctggtgttcctgaaccggcgcggctattcgccc
gccctgcattgcgcctcctgcggctgggtcagccaatgcacgcgctgtacggcattcacg
gtgctgcatcgcggctcgcacggcatgcaccgcctgcaatgccaccattgcggctaccag
gcgcgcgtgccgcgcgcctgccccgactgcggcgaccaggacttgaagcccatggggcgg
ggcacgcaacgggtcgaggaatacctggcagagaaattccccgctgcccgcatttcccgc
atcgatgccgacagcacccgccgcaagggcagcgcgcaggccttgttcgcccaggtgcat
gccggtgaggtcgacatcctggtcggcacgcagatggtggccaagggccatgacttcgcc
aacctgacgctggtgggcgtgctgaacgccgattccatgttgttctcgcaggacttccgg
gctccggaacgcctgttcgcccagctcatgcaggtgtcggggcgcgctgggcgccacggt
ggccagggtgaagtcctgatccagacgggctatccggaacaatccgtctatcaatccttg
ctgcgtcacgattacgaaggcttcgcccggcatgcgctggccgagcgcgaaagtgtcggc
ctgccgccctatgccttccaggcgctgctgtccgcggaagcccgcgagctggcgcaggca
atcgatttcctgcagcgtgcgcgcgacgaggctgaaaatgtccttgccgaggcgggcctg
ccgggcggcgtgacgctatatgatccagtgccgctgcgcgtcgtccgcgtggccaatgtc
gagcgggcccaattgctgctggaaagcgcaagccgccccgccctgctggcgttcctgcgc
cgctgggtgggcgtgttgcccgcgctggctgctgacggccgcgcacgctggctgcttgaa
gtggatccgctggagatctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (38)   

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