KEGG   Olea europaea var. sylvestris (wild olive): 111395304
Entry
111395304         CDS       T05244                                 
Name
(RefSeq) chaperonin 60 subunit beta 4, chloroplastic-like
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
oeu  Olea europaea var. sylvestris (wild olive)
Pathway
oeu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:oeu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    111395304
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oeu03019]
    111395304
   03110 Chaperones and folding catalysts [BR:oeu03110]
    111395304
   03029 Mitochondrial biogenesis [BR:oeu03029]
    111395304
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oeu04147]
    111395304
Enzymes [BR:oeu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     111395304
Messenger RNA biogenesis [BR:oeu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     111395304
Chaperones and folding catalysts [BR:oeu03110]
 Heat shock proteins
  HSP60 / Chaperonin
   111395304
Mitochondrial biogenesis [BR:oeu03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    111395304
Exosome [BR:oeu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   111395304
  Exosomal proteins of other body fluids (saliva and urine)
   111395304
  Exosomal proteins of breast cancer cells
   111395304
  Exosomal proteins of colorectal cancer cells
   111395304
  Exosomal proteins of bladder cancer cells
   111395304
SSDB
Motif
Pfam: Cpn60_TCP1 Mito_fiss_Elm1
Other DBs
NCBI-GeneID: 111395304
NCBI-ProteinID: XP_022877054
Position
6:24804000..24809236
AA seq 578 aa
PLPAVAFTSKSLPIRITKKPSGSLLNASAMAKELYFNHDGSATKKLLAGVNKVAQLIGVT
LGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENVGVKLVRQAGAKTNDLAGDGCT
TSIVLAQGLIAEGIKVTAAGMNPIQISHGIEKTAKALISELKLMSKEVEDHELADVAAVS
AGNDYAVGDMISDALRQVGRMGVVTIEKGNYAENSLRIVEGMQFDRGYLSPYFVTDRQKM
TVEFYDCKLLLVDKKISNPRELFKILENAAKDKYPILIVAEGIEQEALAPIIRNKLRGVL
KVAAIKAPAFGERKSHYLDDIAILTGGTVIRDDMGLTLEKVHKDMLGSASKVVVTKDSTL
MVTDGRTQEAVKVRVSQIQRLVENTDEKFQKKILNERIARLSGGIAILQVGAQTQIELKD
KLLRVEDALNATKAAIEEGIVVGGGCCLLRLSTKVDSIREHLDNDEQKIGADILKRALAY
PARQIAKNAGVNGNTVIQEVLSSDDIRYGYNAAKNRYEDLMAARILDPSKVVRCCLEHAT
SVAKTFLTSDAVVVEIKEPAPKRIRKPMPTSGIGPIGI
NT seq 1737 nt   +upstreamnt  +downstreamnt
ccattgcctgcagttgccttcaccagcaaatcactgcctattaggattaccaagaaaccc
tcaggttccttgttgaatgctagcgccatggctaaagaactgtatttcaaccatgatggt
tcagccaccaaaaaactcctggcaggggttaataaggtagcacagctgattggtgttact
ttgggtccaaagggaaggaatgtggtattgcaaaacaagtacggacctcccaagattgtc
aatgatggtgaaactgttcttaaagagattgagctggaggatcctcttgaaaatgtggga
gtaaaattggtgaggcaagctggggcaaaaacaaatgatcttgctggcgatggttgcact
acctccatagtgctagctcagggtcttattgctgaaggcataaaggttactgcagcagga
atgaacccaattcagatctcgcatgggattgagaaaaccgctaaagccctcatttctgaa
ctaaaattaatgtccaaagaggttgaggatcatgaacttgcagatgttgctgctgttagc
gcaggaaatgactatgctgtgggggatatgatttccgatgctctccgacaagtaggaaga
atgggtgttgtcacaattgagaaagggaattatgctgaaaacagtttacgaattgttgaa
ggaatgcagtttgatcgtggatatttgtctccttattttgtcactgaccgtcaaaagatg
acagtagagttttatgattgcaaattgctattggttgacaaaaaaatctcaaatccaagg
gagttgtttaagatattggagaatgctgccaaagataagtaccccattttgatagttgca
gagggcatcgagcaggaagctctggctccgataattaggaacaaattgaggggcgtattg
aaggtagctgcgattaaagctcctgcatttggtgagcgcaaaagccactatttggatgac
attgccatcttgacaggaggaactgttatccgggatgacatgggattgacacttgaaaag
gttcacaaagatatgttggggtcagcttctaaagttgtagtaactaaggattctacatta
atggttacagatgggcgtacacaagaagctgttaaagtaagagtttctcagatccaaagg
cttgtagagaacactgacgaaaaatttcaaaagaaaatactgaatgaacgtatagccaga
ttatcaggtgggatagcaattcttcaggtgggagcacaaacacagatcgagttgaaggat
aaactactaagagttgaagacgctctaaatgcaaccaaggcagcaattgaggaaggaata
gtagttggcggtggttgttgcctcctcaggctttctacaaaggttgatagtatcagagaa
catttggacaatgacgagcaaaaaataggagcagacattttaaaaagagccttggcctat
cctgcaagacagatagccaaaaatgctggtgtaaatggaaacactgtcatacaggaggtt
ctgtcatcagacgacataaggtatggatacaatgctgcaaaaaatagatatgaggatttg
atggctgctagaatactggatccttcgaaggttgttagatgttgcttggagcatgcgaca
tctgttgccaagacctttttgacatctgatgcagtagttgttgaaattaaggaacctgca
cctaaacgtataagaaaaccaatgccaacctcaggtattggaccaattggcatttaa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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