KEGG   Olea europaea var. sylvestris (wild olive): 111396677
Entry
111396677         CDS       T05244                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
oeu  Olea europaea var. sylvestris (wild olive)
Pathway
oeu03020  RNA polymerase
oeu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:oeu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    111396677
  09124 Replication and repair
   03420 Nucleotide excision repair
    111396677
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oeu03021]
    111396677
   03019 Messenger RNA biogenesis [BR:oeu03019]
    111396677
   03400 DNA repair and recombination proteins [BR:oeu03400]
    111396677
Transcription machinery [BR:oeu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     111396677
Messenger RNA biogenesis [BR:oeu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     111396677
DNA repair and recombination proteins [BR:oeu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      111396677
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N Vg_Tdu
Other DBs
NCBI-GeneID: 111396677
NCBI-ProteinID: XP_022878930
Position
1:complement(28567700..28571317)
AA seq 177 aa
MFFHMILERNMHLHPRHFGRDLRDKLITKLMKDVEGTCNGRHGFIVAITGIESVDKGLVL
DGSGYATFPVKYQCVVFRPFKGEIVEAVVSMVNKMGFFAEAGPVQIFISNHLIPDDMELQ
LGDMPNYSTSDGSVKIQKDCEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDSGQTS
NT seq 534 nt   +upstreamnt  +downstreamnt
atgtttttccacatgatattggaacgtaacatgcatctgcacccacgccacttcggccgt
gatctgcgcgataagctcatcaccaaactgatgaaagacgttgaaggcacttgcaacggc
cgacatgggttcattgtggcgatcactggcattgaaagcgtggataaagggttagttctc
gatggctccggctacgctacatttccggtgaagtatcagtgcgttgtgtttcgacccttc
aaaggagagattgttgaagctgttgtttccatggttaacaagatgggctttttcgctgaa
gcaggacctgtgcaaattttcatttcgaatcatttgataccagatgacatggaacttcaa
ttaggagacatgccaaattattcaacttcagatggatctgttaaaattcagaaagactgt
gaagttcggctaaagattattggaactcgagttgatgctacagaaatcttctgtattggc
accataaaggatgactttctgggtgtgattagtgattctggacaaacttcctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

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