KEGG   Oxalobacter formigenes: BRW83_2026
Entry
BRW83_2026        CDS       T04835                                 
Symbol
xthA
Name
(GenBank) Exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
ofo  Oxalobacter formigenes
Pathway
ofo03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ofo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BRW83_2026 (xthA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ofo03400]
    BRW83_2026 (xthA)
Enzymes [BR:ofo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     BRW83_2026 (xthA)
DNA repair and recombination proteins [BR:ofo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     BRW83_2026 (xthA)
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: ARQ46764
Position
2164111..2164878
AA seq 255 aa
MKIATWNVNSLKVRLPHVLQWLEDNPVDVLCLQETKLTDDKFPVMEIGAAGYQVAFTGQK
TYNGVAILSKKPVTDIVKNNPLFPDEQQRIVAATVDNIRIVCAYVPNGQAVGSEKYSYKL
DWLRSLTQWLAEERQKHPYLALLGDYNIAPEDRDVYDPVAWEGNVLVSPPERDAFRALQD
IDFIDAYRLFEQPEKSYSWWDYRQLGFQKNRGLRIDHILLSKALAPHCTACTIDRIPRKW
TQPSDHTPVIAELDI
NT seq 768 nt   +upstreamnt  +downstreamnt
atgaaaatagctacatggaacgtcaactcgctcaaagtccgcctgcctcacgtattgcag
tggctggaagacaatcccgtcgatgtcctctgccttcaggaaacgaaactgacggacgac
aagtttcccgttatggaaatcggggcagcgggttatcaggtggctttcacaggacagaaa
acctataacggcgtcgctattctttcaaaaaaaccggtaacggatatcgtcaaaaacaat
ccgcttttcccggatgagcagcagcgcattgttgccgcaactgtcgacaatatccgcatc
gtctgtgcctacgtccccaatggacaggcggttggatcggaaaaatattcgtacaaactg
gactggctgcgttccctgacccaatggctggcagaagaacggcaaaaacatccatatctg
gcactattgggtgactacaatatcgcgccggaagaccgcgacgtttacgacccggtggca
tgggaaggcaacgttctcgtttcgccaccggaacgggatgctttccgggcattgcaggac
atcgatttcatcgacgcttaccgtcttttcgaacagcctgaaaaatcatacagctggtgg
gattaccggcagctgggtttccagaaaaaccgcggattgcggatcgaccatatcctgctg
tccaaagcgttggcaccacattgcacggcatgcacaatcgaccgcattcctcgcaaatgg
acacagccttctgaccatacgccggtcattgccgaactggatatctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (28)   

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