KEGG   Oryzias latipes (Japanese medaka): 101158892
Entry
101158892         CDS       T02443                                 
Name
(RefSeq) interferon regulatory factor 3 isoform X1
  KO
K05411  interferon regulatory factor 3
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola04620  Toll-like receptor signaling pathway
ola04621  NOD-like receptor signaling pathway
ola04622  RIG-I-like receptor signaling pathway
ola04623  Cytosolic DNA-sensing pathway
ola05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ola00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    101158892
   04621 NOD-like receptor signaling pathway
    101158892
   04622 RIG-I-like receptor signaling pathway
    101158892
   04623 Cytosolic DNA-sensing pathway
    101158892
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    101158892
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ola03000]
    101158892
   04131 Membrane trafficking [BR:ola04131]
    101158892
Transcription factors [BR:ola03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    101158892
Membrane trafficking [BR:ola04131]
 Autophagy
  Other autophagy associated proteins
   TRIM-directed selective autophagy
    101158892
SSDB
Motif
Pfam: IRF-3 IRF
Other DBs
NCBI-GeneID: 101158892
NCBI-ProteinID: XP_004080549
UniProt: A0A3B3HMY4
Position
19:complement(8113081..8120220)
AA seq 463 aa
MAHPKPLLMPWLWAKIENAEYQGVAWTNAEKTEFSIPWKHGLRGDSSDTDVLIFKAWAEV
SGNGRAQGDPSHWKRNFRSALRVKGFTMVSDNKNDNANPHKIYRWPEESSSRACFAAGSQ
EQTDNNVYNNFIVVDNQLVDFTEDALYLPIEDLIPGCIAGEDILQECLRGLNIDSEAEGI
TGFEPPPEQQQLQNHALIGGPPLPGQQQDPVMFVGAAGETGLPEQPACPPSRAEGGVDGD
EATALFMDTMHRTQDGNSIKTQFRILMYYRGVKVSEKLVENEAGFRLVYRPELLDSVLDV
QNGPSLVSLPGPGNMLDQVQANLTQRILNTLGDGLEVGVSGHLVYGCRRGDTKVFWSFSK
FDTSKTPQEVSKLNPATLFHFKDFLQGIINFSKGGDCPPCSLFFCLGEKWPDPQNRPWTK
KLITIEVVLTSLEILKNIAVEGGASSLQSVELQESLGEMMDLC
NT seq 1392 nt   +upstreamnt  +downstreamnt
atggctcaccctaaacctctcctgatgccttggctgtgggccaaaattgaaaacgctgaa
tatcaaggtgttgcctggacaaacgcagagaaaacagagttctcaatcccatggaaacac
ggtctgagaggggattcctccgacacggatgttctcatctttaaggcttgggctgaggtg
agcggcaacggtcgagctcagggagatccctcacactggaaaagaaactttcgcagcgct
cttagagttaagggcttcacaatggtgtcagacaacaaaaatgacaatgctaacccccat
aaaatatatcgctggccagaagagtcttcttcacgtgcttgttttgctgctggatcccaa
gaacaaactgacaataacgtctacaacaactttattgtcgtagacaaccaattggtcgac
ttcacagaggatgctctttaccttcctatagaagatttaataccaggctgcatagccggt
gaggatatccttcaggagtgtctgaggggcctgaacatcgactctgaagcagaaggaatc
acaggattcgagcctcctcctgagcaacaacagctgcagaatcacgccctgattggtgga
cccccgttgcccgggcaacagcaggatccagtaatgtttgtgggtgcagccggtgaaact
gggttgcctgagcaaccagcatgtccaccgagtagagctgagggaggggttgatggtgat
gaggccactgcactcttcatggatacaatgcacaggactcaagatggaaatagcatcaag
actcaattcaggatactgatgtactacagaggagtgaaggtgtctgagaagctagtagag
aatgaagctggattccgcttagtctacaggcctgagctcttggattcggttttggacgtt
cagaacggccccagcctggtctctctgccaggacctggaaatatgctggatcaagtgcaa
gctaatctcacccaaaggattttgaacactctaggtgacggcctggaagtgggcgtgtcc
ggtcacttggtctacggctgccgacggggtgacaccaaagtgttttggagcttttccaaa
ttcgacaccagcaaaacaccccaagaggtgtccaagctgaatcctgctacacttttccac
tttaaggacttcttgcaaggaataataaactttagcaaaggaggtgactgccccccatgc
tccttgttcttctgtctgggggagaagtggccagacccacaaaacagaccttggacgaag
aaactaatcacaattgaggtggtcttgacttcgctggagatactaaagaatatagcggtt
gaaggtggcgcctcctccctgcagtcagtagaactgcaggagtcactgggggagatgatg
gatctatgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (31)   

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