KEGG   Oryzias latipes (Japanese medaka): 101162609
Entry
101162609         CDS       T02443                                 
Symbol
chfr
Name
(RefSeq) E3 ubiquitin-protein ligase CHFR isoform X1
  KO
K10644  E3 ubiquitin-protein ligase CHFR [EC:2.3.2.27]
Organism
ola  Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:ola00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ola04121]
    101162609 (chfr)
Enzymes [BR:ola01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     101162609 (chfr)
Ubiquitin system [BR:ola04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    101162609 (chfr)
SSDB
Motif
Pfam: zf-CRD FHA zf-C3HC4_2 zf-RING_2 zf-C3HC4_3 zf-C3HC4 zf-CCHH zf-rbx1 zf-RING_6
Other DBs
NCBI-GeneID: 101162609
NCBI-ProteinID: XP_020561827
Position
9:23122681..23140308
AA seq 641 aa
MDSPKGGRPWGKLVKVDSSETVLLFSRECTVGRKKGCYLSFPANKLVSGEHCKIVKDQIS
GLVWIEDTSTNGTVINMSKLIKGQTHLLQNGDVIYFVYRKSEPQQNIAYVYHTIKMEQGE
SLHSYGMESSAQSYSAVPESEMILSVEPLILTKTPRDLAQDEPKPSTSASHFCIENPSSS
GTTVITTSSSSGPPKHAAPAQKHDTDHLEPKLKRRKMSDVLDKECASDLPFTACPEVAGS
ADKDSSKSAVKETKTDKMEESLTCVICQDLLHDCISLQPCMHVFCAACYSGWMERSSLCP
TCRCPVERICKNHFLNNLVEAYLTQHPEKCRSEEDLKSMDSRNKITQDMLQPKVERLFSD
EEGSSDYLFESSDNDSDSSDTSQPLVMCRQCPGYRSYMSQVLLTTSSNCWFAGLPSLPAV
LSSAKPAGEEEAAKLTGEQPSTSSEATSASQVYCCPPQGRHVLCTCCLQPMPDRRAELSS
LPGFAQQCMLCQQPFCHMYWGCQRIGCQGCLSRFSELNLNDKCLDSVLNNNTYESEVLKN
HLSSKGKTWKDLLQESLEGLQEGSFSLTDNVSGNTILCFCCGLRAFKELAYKYRQNIPAS
ELPATVTSRPDCYWGRNCRTQVKAHHATKFNHICEQTRFKN
NT seq 1926 nt   +upstreamnt  +downstreamnt
atggacagccccaaagggggaagaccgtggggaaagcttgtcaaagtggactcaagtgaa
accgttcttcttttcagcagagaatgcacagttggcaggaaaaagggatgttatctgtca
tttccagccaataaacttgtctcaggggaacactgcaagatagtgaaagatcaaatctca
gggcttgtatggattgaagacacaagcacaaacggaacagtgatcaacatgtccaaactg
atcaagggacaaactcacctgctgcaaaatggagacgtcatctactttgtgtacaggaag
agtgaaccacaacaaaatattgcttatgtttaccacactatcaagatggagcagggcgag
tcactacacagctatggcatggagagttcagcccagagttactcagctgttccagagtcg
gagatgattctctctgtggagccactcatcctcacaaagactcccagagacttggcccaa
gatgagccaaagccttcaacttctgcttcccatttctgcattgagaatccctcttcttct
ggcaccacagtgatcacaacgtcttcatcctctggcccacctaaacatgcagctcctgca
caaaaacatgatacagaccatctggaacctaaacttaagaggaggaaaatgtctgatgtt
ttagataaagagtgtgcatcagatttgccattcactgcctgtcctgaagtggctggatca
gctgacaaagactcatcaaaatcagcagttaaagaaaccaagacggataagatggaagaa
tccttgacttgtgttatatgccaggacctgctgcatgactgtatcagcttgcagccttgc
atgcacgtcttttgcgccgcctgttactcaggctggatggagcgctcatctctctgcccg
acgtgccgctgtcctgtagagaggatttgtaaaaaccacttcctcaataacctggtggag
gcatacctcacacagcatccagaaaagtgtcgcagtgaggaggacctgaagagcatggac
agcagaaacaagataactcaagacatgttgcagccaaaagtggagcgtctgttttctgat
gaagagggcagctccgactacctctttgaatcatctgataatgacagcgactcctcagac
actagtcagcctttagtgatgtgcagacagtgtcccggctacaggagctacatgagccaa
gtgctgctcaccacaagttcaaactgctggtttgctggtctgccatcactaccagctgta
ctctcatcagccaagccagcaggtgaagaggaagcagcaaagctgacaggagaacagccc
tcaacatcctctgaagccacatcagcttcccaggtgtactgctgcccccctcagggtcgc
catgtcctctgcacctgctgcctccagccgatgccggacagacgggcagagctcagcagt
ctgccgggctttgctcaacagtgtatgctgtgccagcagcctttctgtcacatgtactgg
ggttgccagaggattggatgtcaaggctgtctgtctcgattcagtgagctcaatctcaat
gacaaatgtctggacagcgtgctgaacaacaacacctatgagtcagaggttctcaagaac
cacctgtcatccaaggggaagacgtggaaagatctgcttcaggagtctttggaaggcttg
caggagggaagcttttctctgacagataacgtttctggaaacaccatcctgtgcttctgc
tgcggcctgcgagccttcaaggagctggcctacaagtacaggcagaacatcccagcgtct
gagctgccagctactgtaacatctcgccctgactgttactgggggcgtaactgtcgcaca
caagtcaaggcccatcatgccacgaaattcaaccacatctgtgagcagacgcgtttcaag
aactaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (9)   
   Pfam (9)   
All databases (48)   

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