KEGG   Oryzias latipes (Japanese medaka): 101165345
Entry
101165345         CDS       T02443                                 
Symbol
chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7
  KO
K14437  chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
ola  Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:ola00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ola03036]
    101165345 (chd7)
Chromosome and associated proteins [BR:ola03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    101165345 (chd7)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C Chromo BRK ResIII DEAD HDA2-3 Myb_DNA-bind_7
Other DBs
NCBI-GeneID: 101165345
NCBI-ProteinID: XP_023821042
Position
17:20968042..21051990
AA seq 3307 aa
MADPGMLSLFGDDAGLFSDGLDSLGECFPQQQAPGQANPLAQQTNPSLNHDHQGNRGYHQ
GMIHGAGAGPGQPKLGQMYEHSPYTSYDQSAAPGGRMMTQNGPSQGPANVNTGMNGMASH
YHNNPANSSNPHHGYQGDAGGGTGGGVWGQQQQSRTVYQQASAAPGGGPNQMGGYQMSQG
SYGGMQGPPTSSAARMNQHYPQQSMAPPPAQDPSHYLGHVAMGGAQMRHPQPQSQSPGYP
SMGHTPRYPHSPSRQSAHPHQQGMAPFAGTQYSGYQTQYGAMGPGIGPGANANVSPNTSQ
SMGPGQLGQRFNQGTGSATGQQGQRYPQGAPHQSQTHQTHPVPLQQQGGQQGQPMHPLNH
PHNLNPPQNQPQPHLVPPAQGSYPSPSSLSPMRVLGTPTPPPQQGRPPSAGLPGPPEVTA
YTTLQSPPTAMAHAQRPPQTPLSAPHPQHQQPHSMPPNAGQMYPGIGPQCGPQMGPNRPQ
LQQQQGPHEAPVTQGGDQCLLQAQQQASRSGQPLQSAPLGFQGPPMGQHGGSAPNQGLAP
SAQNAQAQHTHLPPHPHHLQSTPPPSNQAPHPWAPPPSTSHPLSSPPLTPQKVPHIQHSP
SDLSGDASMMVPDRPPVGTVASGQPICTEKPSDQETKPKKKKKKKAKVAGEQEGNMKTVK
EGEENVKSEFPGAGGDAGEQATGAGTVGGSPPVEEKKKRKKKPKEKAEGKEPKQPKTPKT
PKTPKTPKEPKEPKEKKPKSTTPKAKTPKKTSSKKVESEGGASAAKKDSKRKRELSVSEE
VEVKSPPPSPADEEEDDGVQKRRSSRQVKRKRYTEDLEFRISEDDDSGDDSTTPKSPSSS
SQQQDAGEVEGPVVEKIMGMRSSKKQLESGEEVEMEEFYVKFKGFSYLHCRWAELEELER
DKRIHQKIKRFKAKQQLNNFITEMDDEPFNPDYVEVDRVLDISESTDENGEMVTLYLVKW
CSLPYEDCTWELKADIELSKIEEYERVASRTPNTNRVDRPPAADWKKLESSREYGNGNAL
REYQLEGLNWLTFNWYNSRNCILADEMGLGKTIQSITFLYEMYLMGIEGPFLVIAPLSTI
PNWEREFRTWTELNVVVYHGSQASRKIIQAYEMYFRDGQGKIIKGVYRFHAVITTFEMIL
ADCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDMEHKVLLTGTPLQNTVEELFSLL
NFLEPERFPSEQTFMTEFGDLKTEEQVQKLQGILKPMMLRRLKEDVEKNLAPKEETIIEV
ELTNIQKKYYRAILEKNFSFLSKGGAGGGGGSGAASVPNLLNTMMELRKCCNHPYLINGA
EEKIIEEFRESHGGRTDVPEMALQAMIQAAGKLVLIDKLLPKLKAGGHRVLVFSQMVRCL
DILEDYLIQRRYPYERIDGRVRGNMRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAAD
TCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVL
QSMSGRENANSGVQQLSKKEIEDLLKKGAYGALMDEEDEGSKFCEEDIDQILQRRTHTIT
IESEGKGSTFAKASFVAAGNRTDISLEDPDFWQKWAKKAELDMDAINGRNTLVIDTPRVR
KQTRHYSSVKEDEMLEFSELESDDEEPSSRPTSKQRRPQDKTQGYPRSECFRVEKNLLVY
GWGRWSEILAHGRFKRPLKEADVETICRALLAYCLLHYRGDENIKSFIWDLITPSEDGTT
RTLTNHSGLSTPVPRGRKGKKGKPSAPPPQTPRADWLATCNPDHLLQEDSYKRHLKHHCN
KVLLRVRMLYYLRQEVIGDQAERILDGADSSMLDVWIPQPFHAEVPADWWDSEADKSLLV
GVFKHGYEKYNSMRADPTLCFLERVGMPDAKAIAAEQRGSDMMADGVEGEDEDPEYKPLR
MPFKDDMDDFTNSPLDDMVEGEAEVKSGENGQPSVGGASGSNERLYWPAASALTARLRRL
ITAYQRSNRREQLRQEALSRPDGRRRRRREFLPSIALVPEAGGAATSYIQDGAGVFITEG
GPYLAKGGAYFAKGAQFLAEASPVMTTSSLMTDGAMYYKERRQRWTRREEADFYRVISTF
GVVFDTQRQKFDWTQFRAFARLDKKTDESLEKYYYSFIAMCKRVCRMQIKNEAELPDPTL
IIDPITEERASRTLYRIELLRRIREQVLPHPLLAERLKLCQPSQDLPEWWECGRHDRDLL
VGASKHGVSRTDYHILNDPSLAFLEAHQRYTSQRGAGASVGAQGELAKAGTEAASAPLLT
PAELASAAAAAEAAAKEGEMEGKDVNMDEERAEMEMNIKTEGEDVDSISCIKTETCCDLE
GNRGEVHEMKDETLGSPMKEVKTEETQLKVENQEAEAHREERSEEEEAFKSEKDLTVETL
MPEDGKQKDTSSEVLEDAATAGKVELVHKTTDEEEEDRDNPENPKTPKSADTERSPEEEE
EEEERLDDDDKSEKSSQAEVSAVSEQKNFDEESIASLSMSARDETRDGFCPDDLAETSAL
QALQDRAYAFSFWPKDRVMINRMDNICEAVLKGKWPVNRRHVFDFPSNLIPGHGSTATTA
AVSMVTESPLQRRSLVELTMAGIHTPYSGSEDRASPQIHEDALSLTVPRQRRRRRRKIEI
EAERAAKRRNLMEMVAQLRESHAAAESQNQAIDLTKGVHHHHKASPSFSGFPNTLTNPSL
KAQMELLQQQVPSSGHRANGSLEADLPMIRRRRGRRKNVEGLELLFMGNKRTGGGEDVDE
KKVAALDSVQEVAHPHRGHSVPEQSPSARSLASGSMEEEETAISNKDLGEWLRQHPSYMD
MPGFTPKSEEMLLSQFSKPKQKRHRCRNPNKIDINTLTGDERVPVVNRRNGRKMGGAMAP
PMKELPRWLLENPEFSIAPDWTEIVKQSGFLPEAMFDRLLTGPVVREEGVRRRGRRPKSE
IAKAAAAAQAAAAAQAAQASLASAASSAGGINPLLLNSLFGGMDLSSLQSLQSLQLAAGL
MAFPPPTDPKQSAANAAAASMLPLMLPGMGGLPNMAALPNMFSLGGLFAGNLATASAAPS
ATNSTVTTAVASNGTMEAEGADGEETAKRKRGEKDEDDGDEVLEDEQEARGNEEGLKTKK
RKMEGESGSEGMQKSAGDGAVKLPAADSSTDVSINGDAAALLAAAGMSANSLAFNPFLIS
TMAPGLLYPSMFLPPGLGGLSLPGFPAASTLAELQSAMAGALGGSASTPTASRDEEEEEE
EDKKGEAKAAAEEEEEEAEEEDEDAQGGGQRDLAEGETSGEAERPTLEEKGEEEEEENEE
EAAESPQ
NT seq 9924 nt   +upstreamnt  +downstreamnt
atggcggacccagggatgttgagcttatttggggacgatgcagggctgttctcagatgga
ttagacagtttaggagaatgctttcctcagcaacaagctcctggccaagccaatcctctg
gcccagcagactaatccttctctgaaccacgaccaccagggaaacaggggttatcaccag
ggaatgattcatggcgcaggggctggcccagggcagcccaagttggggcaaatgtacgaa
cacagtccctacaccagctatgatcagtctgctgcaccaggaggacggatgatgacccag
aatggcccaagtcaaggtccggcaaatgtcaacacgggcatgaatggtatggcctcccac
taccataataaccctgctaactccagcaaccctcatcatgggtatcaaggtgatgctgga
gggggaactgggggtggagtttggggccagcaacagcagagcagaacagtatatcagcaa
gcatcggcagcaccagggggcggtccaaaccagatgggaggctaccagatgtctcaaggc
agttatggtggaatgcaaggtccacctacatccagtgcagctcgcatgaatcaacactac
ccccaacaaagcatggcccctcctcctgctcaggatccttctcactacttaggacatgtt
gcaatgggaggggcccaaatgagacacccccaacctcagtcacagtccccgggctatccc
agtatgggccacacaccccgatacccacactccccctccagacagtctgcacacccccac
cagcaagggatggcaccgtttgctggtactcagtactctggataccagactcaatacggt
gccatgggtccaggaataggcccgggtgcgaatgctaacgttagtcccaacaccagccag
tctatgggaccaggacagcttggtcagaggttcaaccagggaacgggctcagcaacgggg
caacaaggacagcgttacccccaaggagcaccacaccaatcccaaactcatcaaacccat
cctgtcccattgcagcaacaaggagggcagcagggccagcctatgcatcccctaaaccac
ccccacaatcttaacccaccccaaaaccaaccgcagccccaccttgttcccccagctcag
ggatcttacccctccccatcatctttatctcctatgcgggttttaggaaccccaaccccc
cctcctcaacagggcagacctccaagtgcaggtctaccagggcctccagaggttacggca
tataccaccctgcagtctccacccactgctatggcccatgcacaaagacctccccagacc
cccctctctgccccacacccacagcaccagcagcctcacagtatgccccccaatgcaggg
caaatgtaccctggaattggaccgcagtgtggtcctcaaatgggaccaaataggcctcag
cttcagcagcagcaggggcctcacgaagcgccggtcactcaaggaggggaccagtgtctg
ctccaagcccagcagcaagcctctcggagtgggcagcctttgcaatctgcccccttgggt
ttccagggtccacctatgggtcaacatggaggctctgccccaaaccagggcttggccccg
tctgcccagaacgctcaagctcagcacacgcatctccctccacacccacaccacctgcag
agcactcctccgccctctaaccaggcccctcacccgtgggcacctccgccttccacttcc
cacccgctctcctcaccccctcttaccccacagaaagtgcctcacatacagcattccccc
tcggacctatcaggtgatgcctcaatgatggttcctgacaggccaccggttggcacagta
gcctcgggccagcctatctgcacagaaaagcctagtgatcaggagaccaagccaaaaaag
aaaaagaagaagaaagcaaaagtagctggagaacaagagggaaacatgaagacggtaaaa
gaaggagaagaaaatgtaaagtcagaatttcctggagcaggaggtgatgccggtgaacag
gcaacaggcgcaggaactgtaggaggttcaccaccagtagaggagaagaaaaagcggaaa
aagaaaccaaaggagaaggctgaggggaaggaacccaaacagcccaagaccccgaaaaca
cccaaaacacctaagactcccaaagaacccaaggagcccaaggagaaaaaacccaagagc
accacacccaaggcaaagactccgaagaaaaccagcagtaaaaaggtggagtcagagggt
ggggctagtgctgctaagaaggattcaaagagaaagagagagttatccgtcagtgaagaa
gtggaggtgaagtccccacctccctcccctgctgacgaagaggaggacgatggtgtacag
aagcgtcgttcaagccgccaggtgaagaggaagaggtacaccgaagacttggagtttagg
atctctgaggatgacgacagtggagatgactcgacaacaccgaaatctccctcatcctcg
tcacagcagcaggatgcgggtgaggttgagggtcccgttgtggagaagataatgggcatg
cgcagctctaaaaagcagctggagtcaggcgaggaagtggagatggaggagttctacgtc
aagttcaagggcttttcataccttcactgtcgctgggcagaactggaggaactggagagg
gataagagaatacaccagaagataaaaaggtttaaagccaaacaacaactaaacaacttc
attactgagatggatgatgagcctttcaaccccgactatgtcgaggtggaccgggtcctc
gacatttcagagagcacagatgaaaatggagagatggtgaccttgtatctggtgaagtgg
tgcagtttgccttatgaagactgtacctgggagctgaaggccgatattgaactctccaag
atagaagagtatgaacgcgttgcgtcacgcacacccaacactaacagagtggatcggcct
cctgcagcagactggaaaaagctggagagctcaagagaatacgggaatggcaacgcactc
agggaataccagctggaaggccttaactggctaactttcaactggtacaactcacgtaac
tgtatcctggcagatgaaatgggtctggggaagaccatccagtccatcacattcctctat
gaaatgtacttgatgggcatcgaggggccgttcttagtcatcgctcctctctccaccatt
cccaactgggagagggagttcaggacctggactgagctcaatgtggtggtctaccatggc
agccaggccagtcgaaaaataatccaggcctacgagatgtacttcagagacggacagggt
aaaataataaagggggtgtatcggttccacgctgtgataacaaccttcgagatgatcctg
gcagactgtccagagcttcgtaacatcccttggcgctgtgttgtaattgacgaggcccac
cggctgaaaaacagaaactgtaaactattagagggactcaaaatgatggacatggagcac
aaagttctgttgacaggaactcctctccagaacacagtggaggaactcttcagcttactc
aacttcctggaacctgagcggttcccgtctgaacaaacctttatgactgaatttggagac
ttgaagactgaagaacaggtccaaaaactgcaaggaattctcaagcccatgatgctgaga
agactgaaagaagatgtggagaagaacttggcccccaaggaggagacaatcattgaggtg
gagttgaccaacatccagaagaaatactatcgggccattctggagaagaacttctccttc
ctctccaaaggaggtgcaggaggaggtggaggaagtggagcagccagtgtgcccaacctt
ctcaacacaatgatggaattaaggaagtgctgcaaccacccctacctcatcaatggagca
gaggagaagatcattgaggagtttagggagtcccatggcggcaggacagacgtgccggaa
atggcccttcaagctatgatccaagccgccggcaagttggtgctcattgacaaactgttg
cctaagctgaaagctggtggacacagagtgctggtgttcagtcagatggttcgatgtctg
gacatcctggaggactatcttatccaaagacgatacccatatgagcgcatcgatggcaga
gttcggggtaacatgcggcaggcagccattgacaggttctccagaccagactcggaccgc
tttgtcttcctgctgtgcacaagagctggaggactgggcatcaacctgaccgcagcagat
acctgcatcatcttcgactctgactggaaccctcagaacgaccttcaggcccaagccagg
tgtcatcgaattggccagtccaagtctgtgaagatctaccgcctgatcaccaggaacagc
tatgagagggagatgtttgacaaggccagtctgaagcttggacttgacaaggcagttctg
cagagcatgagcggacgagagaacgccaacagtggggtccaacagctgtccaagaaggag
atagaagacctgctgaaaaagggagcttatggagctctaatggatgaagaagatgaaggc
tcgaaattctgcgaggaagacatcgaccaaatcctccaaagacgcactcacactataacc
atcgagtctgaaggcaaaggctctacctttgccaaggcaagttttgttgcagcagggaac
cgaacagacatttcgttggaggatccagacttctggcagaagtgggccaaaaaggcggag
cttgacatggatgccatcaatggccggaacacgctggtcattgacacgccgagagtgagg
aagcagacgcggcactacagcagcgtcaaagaagacgagatgctggagttctctgagctg
gagagcgacgatgaagaaccttcatccagacctacatccaaacaacgacgacctcaagac
aaaacccagggttacccccgatccgagtgcttcagggtggagaagaacctgctggtctat
ggctggggtagatggagtgaaatcctggcccacggtcgcttcaaacgccccctaaaggag
gcagatgtggaaaccatctgcagggctctgctggcatattgcctgctgcattacagagga
gatgagaacatcaaaagcttcatctgggacctgatcaccccgagtgaagatggcaccacc
aggacacttaccaatcactccggtctctcgacccccgtccctaggggcaggaagggcaag
aaggggaagccctcagctccacctcctcaaactccgcgtgctgattggttggccacctgc
aaccccgaccacttacttcaggaggacagttataagcgacatctgaagcatcactgtaac
aaggttttgttgagagtacgaatgctttattacctgcgacaggaagtcatcggggatcag
gctgagcgcatcctggacggagcagactccagcatgctggacgtctggattcctcagccg
ttccacgccgaggtcccagcagactggtgggacagcgaagctgacaagtccctgctcgtc
ggcgtctttaaacacggttatgagaagtacaactcgatgcgcgccgaccccaccctgtgt
ttcttggagcgagtaggcatgccagacgccaaagcgatcgccgctgagcaaaggggatct
gacatgatggcagatggtgttgagggtgaggatgaggatccagagtacaagccgctccga
atgcctttcaaagatgacatggatgactttaccaactctccactggatgacatggtggag
ggggaggctgaagttaaatcaggagaaaatggtcaaccttctgtgggcggggcttctggc
tccaatgagcgactctactggccagcggcctccgctctgacagcccgcctgcgccgtctg
atcacggcttaccagcgctccaaccggagagagcagctccgccaggaggcgctcagccgg
cccgatggtcgccgtcgacgacgcagggagttcctgccttccattgccctggttcctgaa
gccggtggagccgcaacatcttacatccaagatggcgcgggggtgttcataacagaagga
gggccgtatttggctaagggaggtgcatactttgccaaaggtgctcagttcctggcagaa
gcttccccagtgatgaccaccagctccctgatgactgatggagccatgtactacaaagag
agacgacaaagatggacgcggcgcgaggaggcagatttctaccgcgttatttccaccttt
ggggtcgtctttgacacccagaggcagaagttcgactggacgcagtttagggctttcgct
cgactcgacaagaaaacggacgagagcttggagaaatattactactccttcatcgccatg
tgcaagcgcgtgtgcaggatgcagatcaaaaatgaagcagaacttccagaccccaccctg
atcatcgaccccatcacagaggagcgggcctcccgcaccctgtaccgcatcgagctgctg
cgccgcatcagagagcaggttctgcctcacccgctgctcgcagagcgcctcaagctctgc
cagccctcccaagacctcccagagtggtgggagtgtggccgccacgaccgggaccttcta
gtgggagcctctaagcacggtgtgagccgcactgattatcacatcttaaatgacccttcg
ctggctttcctggaggcccaccagcgctataccagtcagcgaggggctggtgctagcgtc
ggagctcagggagaacttgccaaagctggcacggaagcagcttctgctcctcttctgacc
cccgcagaactggcgagcgctgcagctgctgctgaagctgccgctaaagagggggagatg
gaggggaaagacgtgaacatggatgaagagagggcagagatggaaatgaatatcaaaact
gaaggagaagacgtcgacagcatttcatgcatcaagacagaaacctgctgtgatctggag
ggaaatcggggagaagtccatgaaatgaaagacgagacactcggttcaccaatgaaggag
gtcaagaccgaagagacccagctgaaggtggaaaaccaggaggcggaagcgcatagagag
gaacgcagtgaagaagaggaagccttcaaatcagaaaaagatttaacggtcgaaaccctg
atgcctgaagacggaaaacagaaggacaccagctctgaggtcctagaagatgcagccacc
gctggtaaagtagagctggtccacaaaacgactgacgaggaagaagaagacagggataac
ccggagaaccccaaaacaccaaagtcagctgacacagaaagaagcccagaggaggaggag
gaggaagaggagaggctggatgatgacgacaaatccgagaagtcctcgcaagctgaagtg
agcgccgtgtcagagcagaagaactttgatgaggagagcatcgcgtctctgagcatgtct
gctcgggatgagaccagagatgggttttgccccgacgacctggcagaaacctctgcactg
caggctctgcaggaccgtgcctatgctttctccttttggcctaaagatcgagtgatgatc
aacaggatggacaacatctgcgaggcggtcctgaaggggaagtggcctgtcaacagacgc
cacgtctttgacttccccagcaacctcattccaggtcacggctccacggcaaccacagca
gctgtatccatggtgacggagagtccgttgcagaggcggagcctggtggagctgacgatg
gctggcatccatacgccgtacagcggcagtgaagacagggcgtcaccgcagattcatgag
gacgctctaagcctgacggtgcctcgtcagaggaggaggaggaggagaaagattgagatt
gaagcggagagggcagccaaaaggagaaacctgatggagatggtggctcagctcagggag
agccacgctgccgccgagtcccagaaccaagcgatagacctcaccaagggggtgcaccat
caccacaaggcctctccgtcgttttctggcttccccaatactctgacgaacccctccctg
aaggctcagatggagctgctgcagcagcaagtgccgtcctctggacaccgagccaatggt
tcgctggaggccgacctgcccatgataaggaggaggcgaggccgcaggaaaaatgtggag
ggcctggagctgctgttcatggggaacaagaggaccggagggggggaggatgtggatgaa
aagaaggttgcggctttggattcggttcaggaagtcgcccacccccacaggggccacagt
gtccccgagcagagccccagcgcccgatcgctggcgtcaggcagcatggaggaagaggag
acggcgatctccaacaaagacctcggagagtggctgcggcagcacccctcctacatggac
atgccaggattcacaccaaagagtgaggagatgctgctgtctcagttctctaagccgaag
cagaaacgccaccgctgtcgaaacccaaacaaaatcgacatcaacaccctgacgggggat
gagagggtcccggtggtgaacagacgaaatggacgcaagatgggcggagctatggctcca
ccaatgaaggagcttccaaggtggttgctggaaaaccctgagttttccattgcgcccgat
tggacagagatagtcaagcaatcgggtttcctccctgaagccatgtttgaccgacttctg
accggcccggtcgtcagggaggagggtgtgcgccgacggggcagacgacccaaatctgag
attgcaaaagcggccgccgctgcccaggcagccgctgcggctcaggctgcgcaggcgtca
ctggcgtctgctgcttcatcagcaggaggaatcaaccctctgctcctcaacagcctgttt
ggagggatggacttgtcgtctctccagagcctccagtctctccagttggctgctgggctg
atggccttccctcctcccaccgaccccaagcagagtgctgccaacgccgccgctgcctcc
atgctgcccctcatgctgccaggtatgggaggcctgcccaacatggctgccctcccgaac
atgttcagcctcggtgggctcttcgccggaaacctggcgacggcctccgctgccccctcg
gcaacaaactccaccgtcaccacggcggtggcgagcaacggaacaatggaggcagaggga
gctgacggtgaggagaccgcaaagaggaagagaggggagaaagatgaagatgatggtgat
gaggtgttagaggatgagcaagaggccaggggaaatgaggaggggctgaagacgaagaag
aggaagatggagggcgagagtggttcagaggggatgcagaaatcagccggcgacggagcg
gtgaagctgccggccgcagactcatcgacagatgtttccatcaacggcgatgccgccgcc
ctgctggctgctgccggcatgtctgccaactcactggcattcaaccctttcctcatctcc
accatggctcctggtctcctctacccctccatgttcctgcccccgggcctcggaggactc
agcctgcctggcttccccgccgcctccaccctggctgagctgcagagcgccatggctgga
gcgctgggcggcagcgcctcgaccccgaccgcctcaagggatgaagaggaggaggaggag
gaggacaagaagggggaagcgaaagctgcagccgaggaagaggaggaggaggcagaggag
gaggacgaggacgcacagggagggggacagagggacttggctgagggggagacgagcggt
gaagccgaacggcccactcttgaagaaaaaggagaggaggaggaggaggagaacgaggaa
gaggcagcagagtctccacagtag

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