KEGG   Oryzias latipes (Japanese medaka): 101167611
Entry
101167611         CDS       T02443                                 
Name
(RefSeq) protein mago nashi homolog
  KO
K12877  protein mago nashi
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola03013  Nucleocytoplasmic transport
ola03015  mRNA surveillance pathway
ola03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ola00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101167611
  09122 Translation
   03013 Nucleocytoplasmic transport
    101167611
   03015 mRNA surveillance pathway
    101167611
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ola03019]
    101167611
   03041 Spliceosome [BR:ola03041]
    101167611
Messenger RNA biogenesis [BR:ola03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     101167611
Spliceosome [BR:ola03041]
 Complex C
  Other components
   EJC/TREX
    101167611
SSDB
Motif
Pfam: Mago_nashi
Other DBs
NCBI-GeneID: 101167611
NCBI-ProteinID: XP_004068194
UniProt: A0A3P9LMB5 A0A3B3HK56
Position
4:23978404..23982198
AA seq 147 aa
MSTSDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEE
LKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGL
RVFYYLVQDLKCLVFSLIGLHFKIKPI
NT seq 444 nt   +upstreamnt  +downstreamnt
atgtctacaagtgatttttatctgaggtattacgtcgggcacaaggggaagtttggacac
gagtttttggaatttgagtttcggcctgacggtaaactcaggtacgccaacaacagcaac
tacaagaatgacgtcatgatcaggaaggaggcctatgtgcacaaaagtgtgatggaggag
ctcaagaggatcattgacgacagcgaaataaccaaggaagatgatgctctgtggccgcca
cctgacagagttggaagacaggagctggagatcgtcatcggagacgagcacatttccttc
acaacttctaaaatcgggtccttaatcgacgtgaatcagtcaaaggatcctgaaggtctc
agagtcttctattacctggtccaggacctcaagtgtctcgtcttcagtctgatcggcctg
catttcaagatcaagcccatctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (196)   
   KEGG ORTHOLOGY (1)   
   RefGene (192)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (208)   

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