KEGG   Oryzias latipes (Japanese medaka): 101168176
Entry
101168176         CDS       T02443                                 
Symbol
rbl1
Name
(RefSeq) retinoblastoma-like protein 1
  KO
K04681  retinoblastoma-like protein 1
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola04110  Cell cycle
ola04218  Cellular senescence
ola04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:ola00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    101168176 (rbl1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    101168176 (rbl1)
   04218 Cellular senescence
    101168176 (rbl1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ola03000]
    101168176 (rbl1)
Transcription factors [BR:ola03000]
 Eukaryotic type
  Other transcription factors
   Pocket domain Rb
    101168176 (rbl1)
SSDB
Motif
Pfam: RB_A RB_B DUF3452 TFIIB Rb_C
Other DBs
NCBI-GeneID: 101168176
NCBI-ProteinID: XP_023811118
Position
5:complement(32774334..32789692)
AA seq 1053 aa
MRGEESSDSESGRMEESSVRRSLEVLCQELNMDEQTASEAMDNFTSIWNTYTLEGEVVHW
LACSLYAACRKGSTPTVGKGLMEGNCVSLTRILRCSKLSLIQFFSKMRKWADMSNLSQDF
RLRMDRLERNFEVSTVIFRKFEPIFMDMFQNPQGSEPPRQPRSRKHRRLPCHISDVFKFC
WTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLVFGNALLCANRKDLINPTFRGLPPQYRAD
CHVVPDEPPPCVLERLCELHDGLVVEAKGIRQHYFRPYIQKLFQRQILRGNQELLTEMLD
PQNFIDNNKAVNREYEEYVLTVGDFDERVFLGADADEEIGTPRKVLPDRSAGQMQQHREK
PASLAPSTPLTGRGYLKEKDLLVTPVSSATQSVSRLQSMVAGLRTAPSENLMQIFRTCSR
DPTGSVLARVKTLGQTFKEHYTNDSEDTPGSHIDFAENRLKLAEILYYKVLENVLVQETK
RLQGRDMSALLEQDIFHCSLMACCLEVVLFSYSSQRTFPWIIDVFKLAPFYFFKVIEVFI
RSEEGLSRDMVKHLNSIEEQVLESRAWTEDSALWSALKAAGNEVPSVEEVNFSSCLDSGS
SNGIQPHLPLAAHSPIIHPRIREFRAGLGSARKEVPPSPLSVHDRYSSPAAGSAKRRLFG
DDPPAPSVGLTSPAGPLPSPAKKLTFSSSGSTTLKIGGQGAQTTVVSLPLQGMSTDRTFT
LIPVSSCDSSGVVTAQFLLTSSPSRPAAAVAMTTEPYTGSGRPRRTGSLALFFRKVYHLA
SVRLRDLCMKLDVSSELRGKIWTCFEHSLVHCTDLMKNRHLDQLLLCSIYIISKITKETH
TFQDIMKCYRSQPQASSYVYRSVLIRRTPKELSADENMEEGSASEEESARKSSQLPGDPP
PVEEERGDLIQFYNTVYVVKMKSFALRYAASDNQADAPPLSPFPSVRAQPLSPRRVSQSH
SLYVSPHKNSPACFSPNSYTYRINSSPSKDLSDINRMIRQGSASRKRAFTMEGDVTMASA
CDSPSKRACPENGGSPDVLLKRLQDVVSERQSH
NT seq 3162 nt   +upstreamnt  +downstreamnt
atgagaggggaggagtcttcggattctgagtcggggaggatggaggagagttcggtccgg
aggagtttggaggtgctgtgtcaggagctcaacatggacgagcagacagccagtgaggcc
atggacaacttcacctccatatggaacacatacactctggagggggaggtggtccactgg
ctggcctgttctctgtacgccgcctgcaggaaggggtccacccccactgtggggaagggg
ctgatggagggcaactgtgtgtccctgacccggatcctgcgctgctccaagctcagcctg
atccagttcttctctaagatgaggaagtgggccgacatgtcaaacctgtcacaagacttc
cggctgaggatggaccggctggagcgaaactttgaggtgtccaccgtgatcttccgcaag
ttcgagcccatcttcatggacatgttccagaacccacagggcagcgagcccccccggcag
ccccgcagcaggaagcacagacggctgccctgtcacatcagtgatgtcttcaagttctgc
tggaccctctttgtctacaccaaaggaaacttccgaatgatcggcgatgacctggtgaac
tcgtaccacctgctgctctgctgtctggacttggtgtttggaaacgctctgctgtgtgca
aacaggaaggacctcatcaacccgaccttcagaggtctgcccccccagtaccgcgcagac
tgccacgtggtgcctgacgagccccctccctgcgtgctggagaggttgtgtgagctccac
gatgggctggtggtggaagccaaaggcatcaggcagcactacttcagaccgtacatccag
aagctcttccagagacagatcttgaggggaaaccaggagctgctgacggaaatgctggac
cctcagaacttcatagataacaacaaagccgtcaacagggagtatgaggagtacgtgctg
acggtgggggacttcgatgagcgcgtcttcctgggagccgacgcagacgaggaaatcgga
acgccgaggaaggtccttccagatcgctctgccggtcagatgcagcaacacagggagaag
cccgcctccctcgctccatccaccccgctgacggggcggggctacctgaaggagaaggac
ctgctcgtcactcccgtctcctcggcgacgcagagcgtcagccggctgcagagcatggtg
gcgggtttgaggacggcccccagcgaaaacctgatgcagatcttcagaacctgctccagg
gatcccactggttccgttctggcccgagtgaagactctgggtcagaccttcaaggaacat
tacaccaacgactcggaggacaccccgggttctcacatagactttgcagagaaccgcctg
aagctggctgagatcctctactacaaggttctggagaacgttctggtgcaggagaccaag
cggctgcagggcagagacatgagcgctctgctggagcaggacatctttcactgctcgctg
atggcgtgctgcctggaggtggtgctgttctcctacagctcgcagaggacgttcccgtgg
atcatcgacgtcttcaaactggccccgttttacttctttaaggtgatcgaggtgttcatc
cgctctgaggagggcctgtccagagacatggtgaagcacctgaactccattgaggagcag
gttctggagagcagagcgtggaccgaagattctgcgctgtggagcgccctgaaggctgca
gggaacgaagttccctccgtggaggaggtcaacttctcctcctgtctggactcgggttcc
tctaacggcattcagcctcacctgccgctggcggcccactcccccatcatccacccccgc
atccgggagttcagggccggtttggggagcgcgcggaaagaggtgcccccctctccgctg
tcggttcacgacaggtacagctccccggcggccgggagcgccaagcggcgtctctttggc
gacgaccctccggctccgtctgtgggcctgacctcccccgcggggccgctgccctcccca
gccaagaaactgaccttcagctcaagcggcagcacaacgctcaagatcggtggccaagga
gctcagacgacggtcgtgagtctcccactgcaaggcatgagcaccgaccgcaccttcacc
ctcatccccgtgtcttcctgcgattcctccggagtggtgaccgcccagttcctgctgacg
tcgtccccgagccgacccgccgccgctgttgccatgacgaccgagccgtacacgggaagc
ggccggccgcggcgcacgggatcgctcgccctgttcttcaggaaggtgtaccacctggcc
agcgtgcggctcagggacctgtgcatgaagctggacgtctcctcggagctgcgggggaaa
atctggacgtgcttcgagcactcgctggtccactgcaccgacctgatgaagaaccgccac
ctggaccagctgctgctctgcagcatttacatcatctccaagatcaccaaggagacccac
accttccaggacatcatgaagtgttaccgcagccaaccgcaggccagcagctatgtgtac
cgcagcgtgttgatacgccgcacgcccaaagagctgtccgccgatgaaaacatggaggag
ggttctgcctccgaggaggagtctgcaaggaagagcagccagcttccaggagacccgcct
cccgtggaggaggagcgcggcgacctgatccagttctacaacaccgtctacgtggtgaag
atgaagagcttcgctctgcgatacgccgccagcgataaccaggcggacgcgccgccgctc
tcgccattcccgtcggtgcgggcccagccgctgtcgccgcggcgagtctctcagagccac
tcgctgtacgtgtccccccacaagaactcccccgcctgcttctcccccaactcctacacc
tacaggatcaacagcagcccgtccaaggatctgtcagacatcaacaggatgatccggcag
ggctctgccagcaggaagagggccttcaccatggagggggacgtgaccatggcgtccgcg
tgcgactcgccaagtaagagggcgtgtccggagaacggcggcagcccggacgtgctgctg
aaacgtctgcaggacgtggtgtcggagaggcagagccactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (34)   

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