KEGG   Oryzias latipes (Japanese medaka): 101170323
Entry
101170323         CDS       T02443                                 
Name
(RefSeq) TNF receptor-associated factor 5
  KO
K09849  TNF receptor-associated factor 5
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola04217  Necroptosis
ola04621  NOD-like receptor signaling pathway
ola05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ola00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    101170323
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    101170323
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    101170323
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ola04121]
    101170323
Ubiquitin system [BR:ola04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    101170323
SSDB
Motif
Pfam: TRAF-mep_MATH zf-TRAF zf-TRAF_2 zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 zf-RING_2 Sina_ZnF TRAF3_RING zf-C3HC4_4 U-box
Other DBs
NCBI-GeneID: 101170323
NCBI-ProteinID: XP_004065654
Position
1:complement(3626510..3638128)
AA seq 584 aa
MASSETTGGKSQESSLHSDDARRSLGSRLESGESPMRSAGSMASWESELASLQHSLKFVM
KLKEEFICPICKGVVLNPQQNSCGHIYCFHCLQGLLESSLLSGPVCPVEKAAITPSEVFQ
DNCCKREISSLEVYCTNSPLCTSVLALNQLQEHLKSCQYEQLLCSNPGCTELLQRRLLQE
HLNATCPHRRESCPHCLQPFQLSVIQDHVQSSCPEVKVGCPDGCSTLVPRNRLTEHGESC
PEVHTDCSFKMFGCSVKGKRRKVKLHEEAAVCHHVLLVLKSSAHLEQQVVFVQKEALLRQ
QEVQTDTLLLSDLQEQLGSVLQQSRSQEHIVATAQRTLSRQEDALSSVQLDLQQVSCGMG
SGLDELRRFKTSLDGVMQELLAAETLREHIATLEENRKRHSGLLELHVAQLALNKQHLQE
LELTSYDGRLIWKIKDFQKRREAEATGQHPCLSSVPFHTGRCGYKMAMKAYLNGDGEGRG
THLSLYVVLMPGDFDALLPWPFKQTVSLSVLDQSGARNHQSFNFRPDPTNTCFHQPAAES
ASNVAVGFPCFISLDALEAPGNAVYVKDDTLFVKVKVDTTGLEL
NT seq 1755 nt   +upstreamnt  +downstreamnt
atggcgtcgtcagaaaccaccggggggaaatctcaggagtccagtttacactctgacgac
gcgaggcggtctttggggtccaggctggagtccggggaatccccgatgagatcggcaggt
tccatggcctcctgggaatccgagctggcctctctccagcactccttgaagtttgtgatg
aagctgaaggaggagttcatctgtcccatctgcaaaggagtcgttctcaatccccaacag
aattcctgtggacacatctactgcttccactgtctccagggacttctagagagctctttg
ctgtccggtcctgtttgtccggtggagaaagctgccatcaccccctcagaggttttccag
gataactgctgtaaacgtgaaatctccagcttagaggtctactgcaccaactccccactg
tgcacgtctgtcctggcgttgaaccagctacaggagcatctgaagtcctgtcagtacgag
cagctgctgtgcagcaacccgggctgcacggagcttcttcagaggaggctcctgcaggag
cacctgaacgccacctgtcctcaccgccgggagtcctgcccccactgcctgcagccgttc
cagctcagcgtcatccaggatcatgtgcaaagctcctgtccagaggtgaaggtgggctgt
cctgatggctgctccactctggtccccagaaacaggctgacggagcatggcgagtcttgt
cctgaggttcacaccgactgttccttcaagatgtttggctgctctgtgaagggtaaaaga
aggaaagtgaagctgcacgaagaagcggctgtttgtcaccacgtgctgctcgtcctgaag
agcagcgctcacctggaacaacaggtggtgtttgtccagaaggaggcgctgttgaggcag
caggaggttcagacggacaccctgcttctgagtgacctgcaggagcagctggggtctgtg
ctgcagcagagcagaagtcaggaacacatcgtcgccactgctcagaggactctaagcagg
caggaggacgccctgtcttctgtccagctggacctccagcaggtgtcctgtgggatgggt
tctggtctggacgagctgaggcggttcaagacatctctggatggagtgatgcaggaactg
ttggcagccgagacactcagagagcacatagcaactctggaggagaataggaagcgtcac
tcgggtctcttggagctccacgtcgctcagctcgctctcaacaagcagcacctgcaggag
cttgagctgacctcctacgacggcagactcatctggaagatcaaagatttccagaaaaga
agggaagccgaagccacgggtcagcatccgtgtctgagcagcgtgcccttccacaccgga
cgctgcggctacaagatggccatgaaggcctacctcaacggagacggggaaggacgagga
actcacctgtccctttatgtcgttctgatgcccggagacttcgatgctcttctgccgtgg
cctttcaaacagaccgtgtctctgtctgttctggaccaaagcggcgccaggaaccaccag
agttttaatttcaggcctgaccccacaaacacatgcttccatcagccggctgcagagtcg
gcgagcaacgtggccgtcggctttccgtgcttcatttctctggatgcgctggaagctcca
ggaaatgctgtgtacgtcaaagacgacacgctgtttgtcaaggtgaaggtggacacgacg
ggcttggagctctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (47)   
   KEGG ORTHOLOGY (1)   
   RefGene (43)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (11)   
   Pfam (11)   
All databases (70)   

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