KEGG   Oryzias latipes (Japanese medaka): 101172101
Entry
101172101         CDS       T02443                                 
Name
(RefSeq) vinculin isoform X3
  KO
K05700  vinculin
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola04510  Focal adhesion
ola04520  Adherens junction
ola04810  Regulation of actin cytoskeleton
ola04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ola00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    101172101
   04520 Adherens junction
    101172101
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    101172101
   04810 Regulation of actin cytoskeleton
    101172101
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ola04812]
    101172101
   04147 Exosome [BR:ola04147]
    101172101
Cytoskeleton proteins [BR:ola04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     101172101
Exosome [BR:ola04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   101172101
SSDB
Motif
Pfam: Vinculin Mob_Pre
Other DBs
NCBI-GeneID: 101172101
NCBI-ProteinID: XP_011482810
UniProt: A0A3B3H8N9
Position
15:23900753..23925665
AA seq 1126 aa
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTVPVAAVQAAVSNLVRVGKE
TVQTTEDQVMKRDMPPAFIKVENSCSKLVQAAQMLKSDPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLITYTKNLGPGMTKMSKMIEERQQ
ELTHQEHRQMLVSSMNTIKELLPVLISAIKIFVATKSTRGAGVEEAERNRRFTFEKMSTE
INEIIRVLQLTTWDEDAWANKQDMEALKRSLALIESRMAQAKSWLKDPHGQPGDSGELAL
RVILDEAGKVGELCAGKERKDVLATTKALGQMTDQIADLRARGQGPTPGCVQRAGQCSQG
LDLLYGKVDSAARRLEALISAKQAIARKLDAAQAWLADPNGGPEGEENIRALLAEAKRIA
DLCEDPKERDDILRSISEIVGLTTRLAELRKQGKGDSPEARALAKQIGGALLTLQSKTNR
AVANMRPAKPAVTLEGKMEQALRWVNNPGVDDRGVGQAAIRGMVGEGRRLAAGLLGPYRQ
DMIGRCDRTEGLMAALADMAGRGEAEAPHARVTAAQLQDSLKDLRQHMQEVMTQDVSDVF
SDTTTPIKLLAVAATAPPDAPNREEVFDERAGNFETHASRLGATAEKAAAVGTANKSTVE
GIHATVKHARELTPQVTSAARILLRNPGNKAAYEHFDTMKNQWIDNVERLTGLVDEAIDT
KSLLDASEEAIKKDIDKCRVAMANVQPQMLVAGATSIARRANRVLLVAKREVENSEDPRF
RDCVKHASDILSHTISPMVMDAKAVAGNIQDKALQKAYLDSCLRILAAVGKVREAFQPQE
PDFPPPPPDLDQLHVSDEQAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVLSEPMM
VAARQLHDEARKWSSKPEDEEAIEEREVDDEDEFTDGEDDYEPELLMMPSNQPVNQPILA
AAQSLHQEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRALIQCAKDIAKASDE
VTRLAKEVAKQCTDRRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESEQAT
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq 3381 nt   +upstreamnt  +downstreamnt
atgccggtgtttcacaccaagaccatcgagagtatcctggagccggtggcccagcagata
tcccacctggtcatcatgcacgaggagggggaggtggacgggaaagcaattccggatctg
acggtaccggtggctgcggtgcaggcggcagtcagcaaccttgtgcgggtgggaaaagaa
acagttcaaaccacagaagaccaagtgatgaagagagacatgccacctgcttttattaag
gtggagaactcatgttccaagctcgtccaggcggctcagatgttaaagtcagatccatac
tctgttcctgcccgggattacttgatcgatggatccagagggatcctctcgggaacatca
gacctgctccttacctttgatgaagcagaggtgcgtaaaataatccgtgtgtgtaaaggt
atcctagagtatctgacggttgctgaagtggtggagacaatggaggacctcatcacttac
accaaaaaccttggaccagggatgaccaaaatgtcaaagatgattgaggagaggcagcag
gagctgacccaccaagagcacagacaaatgctcgtcagttccatgaacaccataaaggag
ctgctcccggtccttatctcggccataaaaatttttgtagcaaccaagagcactcgtggt
gccggtgtggaggaggcagagaggaacagaaggtttacttttgaaaagatgagcaccgaa
atcaacgagatcattcgagtcttacagctcacaacatgggatgaagacgcatgggccaat
aagcaggacatggaggctttgaagagatctctggctttgattgagtcaaggatggcacaa
gctaaaagctggctcaaagaccctcatgggcaacctggagactctggtgagctggcactg
cgagttattctagacgaagctggtaaagtgggagaactgtgtgctgggaaagagaggaaa
gacgttctggcgaccactaaggctcttggacaaatgactgatcagattgcagatctacga
gccagaggtcagggaccaacccccggttgtgtgcagcgtgcaggacagtgctcacagggc
ttagatttgttatatggcaaagtggacagtgctgcacgcagactggaggcattgatcagt
gcaaagcaggctattgccaggaagctggacgctgcacaggcatggctggctgatcccaat
gggggtccggagggggaagagaacatcagagccttgctggcagaagccaaacgtatagca
gatctatgtgaggaccccaaagagagagatgacatcctgcgctccatcagtgagattgtt
gggctcaccactaggcttgcagagctccgcaaacagggtaaaggtgacagcccagaagct
cgtgcactcgcaaagcagataggaggagccctcctgacccttcagtccaaaaccaatcgg
gctgtggccaacatgagaccagccaagcctgctgtgaccttggagggcaaaatggagcag
gccctgcgctgggtgaacaacccaggtgttgatgacagaggcgtaggtcaggcagcaatc
agaggaatggttggggagggaaggaggctggcagcaggattgttaggcccgtaccgacag
gatatgatcggacgctgcgaccgaacagaggggctgatggctgctttagcagacatggca
ggcaggggggaggctgaggcaccccatgcacgagtgacagctgcacaactgcaggattcc
ctcaaggacctgagacaacacatgcaggaggtgatgacccaggatgtatcagatgttttc
agtgacaccacgaccccaatcaagctactagctgtggctgcaactgctccacctgatgcc
cccaacagagaggaggtttttgatgagcgtgcaggaaattttgaaacccatgcaagtcgt
ttgggagcgactgcagagaaggctgctgctgtgggaacggccaataaaagtacagtagag
ggcatccatgctactgtgaaacatgccagggagcttacgccgcaggtgacctccgctgct
cggattttacttagaaatcctgggaacaaagcagcttacgagcatttcgacaccatgaag
aaccaatggattgataatgtggagagactcactggtttggtggatgaagccattgacacc
aaatctctgctagacgcttctgaggaggcaataaagaaagatattgacaagtgtagggtt
gcaatggcgaacgttcagcctcaaatgcttgttgccggggcaacaagcatagcaagacga
gctaacagggtcctgttagtggccaagagggaagttgaaaactcagaggatccgcggttc
cgagactgcgtaaagcacgcatccgacatcctctcacacacaatctcaccaatggtgatg
gacgccaaggcggtggctgggaacattcaagacaaagctctacaaaaagcatatttggac
tcatgtttgaggatcctggctgcagtaggaaaagttagagaagcttttcagcctcaggaa
ccagacttccctcctccaccccctgacctggatcagctccatgtgagtgatgagcaggct
ccacccaaaccccccttaccggaaggagaagtgcctccaccccggcctcctccaccagag
gaaaaggacgaggagtttccggagcagaaagcgggcgaggtgctcagcgagcccatgatg
gtggcggcacgtcagctgcatgacgaggcacgcaagtggtcgagcaagcctgaggatgag
gaggcaatagaggagagggaggtagatgatgaagatgagtttactgatggtgaggatgac
tatgagccagaactgctgatgatgccgtccaaccagcctgtcaatcaacccattctggca
gctgcccagtctctccaccaggaggcgcgcaagtggtccagcaagggtaacgacatcata
gcagcagccaagaggatggctctgctcatggcagaaatgtctcggctggtgcgcggcggg
agcgggaacaaaagagccctgattcaatgcgctaaggacatcgccaaggcttcggatgaa
gtcacaagactggccaaagaggtggcaaaacagtgcactgacaggcgaatcagaactaac
ctgctccaggtctgtgagcggatccctaccatcagtactcagctgaagatcctctccacc
gtcaaagccaccatgctgggccgcacaaacatcagtgaagaggagtcagagcaggccact
gaaatgctggttcacaatgcccaaaatctgatgcagtcggtgaaggagacggtcagagaa
gcagaagcagcctccatcaagatccgcacagacgcggggttcaccctgcgctgggtgcgg
aaaaccccctggtaccagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (34)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (8)   
   UniProt (1)   
   RefSeq(pep) (7)   
DNA sequence (7)   
   RefSeq(nuc) (7)   
Protein domain (2)   
   Pfam (2)   
All databases (63)   

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