KEGG   Oryzias latipes (Japanese medaka): 101173543
Entry
101173543         CDS       T02443                                 
Symbol
usp3
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 3
  KO
K11986  ubiquitin carboxyl-terminal hydrolase 3 [EC:3.4.19.12]
Organism
ola  Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:ola00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ola01002]
    101173543 (usp3)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ola04121]
    101173543 (usp3)
Enzymes [BR:ola01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     101173543 (usp3)
Peptidases and inhibitors [BR:ola01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   101173543 (usp3)
Ubiquitin system [BR:ola04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    101173543 (usp3)
SSDB
Motif
Pfam: UCH UCH_1 zf-UBP
Other DBs
NCBI-GeneID: 101173543
NCBI-ProteinID: XP_023811557
Position
6:16833585..16843498
AA seq 584 aa
MECSHLSLNISCTTDSPRFPNGTPSSWCCNVCRSNKSPWICLTCLMVHCGRYVNGHAKKH
FEDNQGPGFCQRKGDRQEKEKTQHSLCMDCSSFSVFCYRCDDFVVNDTKLGQVQKLREQL
QSLENSLLMGDRQRKRKFQENSASDGKLLKDGENVALGATGLRNLGNTCFMNAILQSLSN
IEQFSCYFKELPAVALRSGKTAGRRMYHTRSQGDNSVSLVEEFRKTLCSLWQGNQTAFSP
DSLFYAIWKIMPSFRGYQQQDAHEFMRYLLDHLHRELQYSRNGASHPVSPQDGVRLSSAE
GKCCTNGAPSVVTSIFGGLLQNEVNCLICGTESRKFDPFLDLSLDIPSQFRQKRSKDQEP
SPTCTLRDCLYSFTDLEELDETELYYCHKCKKRQKSTKKFWIHNLPKVLCLHLKRFHWTA
FLRNKIDTYVEFPLKGLDMRGYLLEPENSLPGSCLYDLVAVVVHHGSGVGSGHYTAYGSH
EACWYHFNDSTVTLTNEDTVRKAKAYILFYVERTAEVPSDKVAADGAATGDPDVDEAPTH
SVSFEMNPQANSAADSAQTDMALTDATAAHIDTLEEECAKPWQV
NT seq 1755 nt   +upstreamnt  +downstreamnt
atggagtgctctcacctaagcctgaatataagctgtaccactgattcacccagattcccc
aatggcacaccgtcgtcctggtgttgcaatgtgtgcaggtctaataagagtccttggatc
tgccttacctgtttgatggtgcattgtgggcgatatgtgaatggacacgcgaagaaacat
tttgaggacaaccaaggtcctggcttttgtcaaaggaagggtgacaggcaggagaaggag
aaaacccagcattctctgtgcatggactgtagcagcttcagtgtattttgttacagatgt
gatgactttgttgtcaacgacacgaagcttggacaggttcagaagctgagggagcagcta
cagagtttagaaaattctttacttatgggagaccgacagaggaaaaggaagtttcaggaa
aactcggcttcagatggaaagctattaaaagacggtgaaaatgtggctctaggtgcaaca
ggtctgcggaatttgggcaacacgtgcttcatgaatgccattctgcagtctctcagtaac
atcgagcagttcagctgttactttaaagagttgcctgcagttgctctgcgcagtggtaag
actgcaggaagaaggatgtaccacacccgcagccaaggggacaacagtgtgtctttggtg
gaggagttcaggaaaactctctgttctttgtggcaaggaaaccagactgccttcagtcca
gattccttgttctatgccatttggaaaatcatgccaagtttcagaggctaccaacagcag
gatgcccatgagttcatgcgctacttgctggatcatctccacagggagcttcagtacagc
cgcaacggggcgtcgcacccagtctctcctcaggatggagtcagactctcatctgctgag
ggaaaatgttgcacaaacggggctcccagtgtcgtcacatctatttttggtggtttactt
caaaatgaagtgaactgcttgatttgtggaacagaatcccggaagtttgatccatttctt
gatctgtccttggacattcccagtcagttcagacaaaagagaagcaaagaccaggagcca
agcccaacatgcaccctgcgtgactgcctatacagcttcactgatctggaagaacttgat
gagacagagctgtattattgccataagtgtaaaaaacggcagaaatcgacaaagaaattt
tggatccacaacctacctaaggttttatgtctgcacctaaagcgattccactggacggcc
tttttgagaaacaagattgacacttatgtggagttcccactgaaaggcctggacatgagg
ggctacttactcgagccagagaattccttaccagggagttgcctgtatgaccttgtggct
gttgtggtccatcatggatccggggttggatcggggcattatacagcatatggcagccac
gaggcctgctggtatcacttcaatgacagcacagtgactctgaccaatgaggacacggtg
aggaaggccaaggcctacatactcttctatgtggagaggactgctgaagttccctcagac
aaggttgccgcagacggggcggcgacgggcgatcctgacgtggacgaggcaccgacacac
agtgtttcatttgaaatgaaccctcaggccaacagtgcagcagattcggcacagacagac
atggctttaacggacgcaactgctgcacacattgatactttggaggaggaatgtgccaag
ccatggcaggtttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (40)   

Download RDF
DBGET integrated database retrieval system