KEGG   Oryzias latipes (Japanese medaka): 101174408
Entry
101174408         CDS       T02443                                 
Symbol
sema6d
Name
(RefSeq) semaphorin-6D isoform X1
  KO
K06842  semaphorin 6
Organism
ola  Oryzias latipes (Japanese medaka)
SSDB
Motif
Pfam: Sema PSI
Other DBs
NCBI-GeneID: 101174408
NCBI-ProteinID: XP_011486693
UniProt: H2LC93
Position
3:complement(13105611..13126396)
AA seq 1103 aa
MGQRAALLLSELLLLLLTASRSLLAVSFPEDVAPLDVVDAHFSRRYPVFRGRPSANESQH
RLDFQLMTKIQDTLFIAGRDQVYLVSLRESYRNEIIPYRKLTWRSGQDDRDMCAVKGKHR
DECHNFIKVLVPRNDDLVFICGTNGFNPMCRYYRLDNLEFDGEEINGLARCPFDSKQTNV
ALFAEGKLYSATVADFQASDSVIYRSMGDGSALRTIKYDSKWLKEPHFLHAAEYGNYVYF
FYREIAVEHSNLGKVVYSRVARICKNDVGGSQRVLEKHWTSFVKARFNCSVPGESFFYFD
VLQSITDIININGVPSVVGVFTTQMNSIPGSAVCAFSMADIEKVFWGRFKEQKTPDSVWT
PFPEEKLPKPRPGSCAGHGPAASFKSSIEFPDETLQFIKSHPLMDTAVPSTGDEPWFTKT
RVRYRLTALAVDNEAGPHKNYTVVFIGAESGVILKVLAKTSPMLLNDSLLLEEIDVFNKA
KCLSNHDDDKRVLSLHVDKDAHSLYVAFSSCVIRIPLSRCERHSSCHKSCIASRDPYCGW
RSHGACERIQPGVLTGYEQDVELGNTAHLGDCHAFLGSTSVPDFKPFGDPTSDMELSSAP
VTAQPSGPIHPPVLISTHSPGAEPGSGSVPKDDPTTSHSLKSFPGVPEGVVNNQLGDTNQ
MVHMNILITCVFAAFLMGALLAGLIVFCYRDSFLRKPRRVHKDAESDAPSCSDSAGSFVK
LNGLFDSPVKEYQTNMDSPKLYTNLLSNGKDLNTSNGDTKTMILRDGCQPPELAALPTPE
STPVLQQKGLQPIKNQWERAHGKVSGSHKESNSSAKSPQFLLSSPAPANPHHPHLGLGHS
HIPSAVVLPNATHEHQNTDNEDEPLPHSSEKKLKNIDAKGGRRDQKRSVDARNTLNDLLK
HLNDSVANPKAIFQEGSGPHQRPQLTLEPMEELTEMPPKVPSREASLYSPSSSLPRHSPT
KRVDVPMPTTPTTPTGSLSMGGTLERQRGGYQLHRSASHRQSLSTSPNVTMGVSVSRQQS
MNRGGYMPPTPPSRLDSHGALVASGMHTPNPSSLSRQSSYSGHGSLPRTGVKRTPSIKPD
VPPKPNGFSPQTPQMRVVNKYSY
NT seq 3312 nt   +upstreamnt  +downstreamnt
atgggccagagagctgcgctactgctcagtgagcttctgctactgttgctgacagcctcg
cgctctctcctcgcagtcagcttcccagaggatgtggcgcccctcgatgtcgttgacgca
catttttcccggaggtaccccgtgttcagaggcaggccctctgcgaacgagtcccagcat
cgccttgactttcagctgatgaccaagatacaggacactctgttcattgctggcagagat
caggtgtacctagtcagtctgagagaatcctacaggaatgagatcattccttaccggaag
ttaacatggcggtcgggccaagatgacagagatatgtgtgctgttaagggaaaacacagg
gacgagtgccacaacttcatcaaagtgttggtccccagaaacgatgacctggtctttatc
tgtggtacgaacggctttaaccccatgtgcagatactacaggctggataacctcgagttt
gatggcgaagagatcaatggtttggcacggtgcccatttgactccaagcaaaccaatgtt
gccctatttgccgagggaaagctgtattctgcaactgtggccgacttccaagccagtgat
tctgtaatctatcgcagtatgggtgatggatcagctttaagaaccatcaaatacgactcc
aaatggttaaaagaacctcatttcctgcatgcagccgagtatgggaactatgtgtatttt
ttctaccgagagattgcagtggagcacagcaatttggggaaggttgtgtattccagagtg
gctcggatctgtaaaaatgacgtgggagggtcacagcgggtgctggagaagcactggacg
tcctttgtgaaggcgaggttcaactgttcagtgccaggggagtcattcttctactttgac
gtgctccagtccatcactgacatcatcaacatcaacggagtcccctcagtggtcggggtt
ttcaccacacagatgaacagcatcccaggctcagctgtctgtgccttctccatggccgac
atagagaaagtgttctgggggcgcttcaaagagcagaagaccccagactctgtgtggact
ccatttcctgaagaaaaactacccaaacccagaccgggaagctgtgcaggtcacggtcca
gctgcgtcctttaagagctctatcgagttcccggatgaaaccctgcagttcatcaagtcc
caccccctcatggacacagcagtgccttctaccggggatgaaccttggttcaccaagacg
cgtgtccggtacagactaacagcactggctgtggacaatgaagctggacctcacaagaac
tacacagtggtgtttatcggtgctgaatcaggggtcatcctcaaggttttggctaagact
tcccccatgctcttgaatgacagcctgctcctggaggagatagatgtcttcaataaggcc
aagtgtctgtctaatcatgacgatgacaagcgtgtcctctcgctgcacgtggacaaggac
gcacacagcctttatgtcgccttttcgagttgtgtaatccgcattccgctgagtcgctgc
gaaaggcattcttcttgccacaagtcttgcattgcatcaagggatccatactgtggctgg
aggtctcacggtgcttgtgagaggatacagccgggtgttttaactggatatgagcaagac
gttgaattaggaaatactgcccatcttggagactgccatgcttttttgggcagtacttca
gtgccagatttcaaaccatttggtgaccctacctctgacatggagttgtcatctgcgcca
gtcactgcccagcccagtgggcccatacaccccccagtactcatatccactcacagccca
ggtgctgagcctggctcaggctctgtgccgaaggacgacccaaccacctcccattcttta
aaatctttcccaggggtgccagagggcgtggtgaataaccaattaggcgataccaaccag
atggttcacatgaacatcctcatcacctgcgtctttgctgcgtttcttatgggagctcta
ctggctggtctgatagtgttctgctaccgggactcgtttctacgcaaaccaagacgcgtg
cacaaggatgcagagtctgacgcaccatcttgctctgattctgctggaagttttgtcaag
ctcaatggcctttttgacagtcctgtaaaggagtaccaaacaaacatggattctcctaaa
ctgtacaccaacctgctgagtaatggcaaagacttgaatacatccaatggtgacaccaag
acgatgatcctacgggatggatgtcagccaccagaactagctgctctacccacaccggag
tctacaccagttctccagcagaaaggcctacagcctataaagaaccaatgggagagggct
catgggaaggtcagcgggtcccacaaggagtctaattcatcagcaaagagtccacagttc
cttctctcttctcccgcccctgccaatccccaccaccctcaccttggtctgggacattct
catattcccagtgcggttgtcttgccaaatgccacccatgagcatcagaacactgacaac
gaggatgaacctctgcctcattcttctgaaaagaagttgaagaatatagatgctaaaggg
ggtagaagagatcagaagaggtctgtggatgccagaaatactttaaatgatcttttaaaa
cacctcaatgactctgtggcaaaccccaaggccattttccaagaggggtcagggccccac
caaaggccacagctcacactggagcccatggaggaattgactgaaatgcctcccaaggtg
cccagtcgtgaggcttccttgtactctccctcctcctccttgccaaggcacagccctaca
aagagggttgatgtgcccatgcccacgactcccaccacaccaacaggaagtctgagcatg
gggggcacattggagagacaaagaggtggttatcaactccatcggagtgcttctcacagg
cagtccttatccacctcaccaaatgtgaccatgggggtatctgtatctcgccaacagagt
atgaacagaggaggttacatgcccccgacgcccccatcaagacttgattcccatggtgca
ctagtagcatcaggaatgcacacacccaacccttcttctttgtcacggcagagcagctac
agtggtcatggctcactcccccgcactggggttaaacggaccccttctataaagccagat
gtacccccaaaaccaaatggattttctccacagactccacaaatgagagtggtcaacaag
tacagttattag

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (2)   
   Pfam (2)   
All databases (38)   

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