KEGG   Oryzias latipes (Japanese medaka): 101174573
Entry
101174573         CDS       T02443                                 
Symbol
rnf103
Name
(RefSeq) E3 ubiquitin-protein ligase RNF103
  KO
K15695  E3 ubiquitin-protein ligase RNF103 [EC:2.3.2.27]
Organism
ola  Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:ola00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ola04121]
    101174573 (rnf103)
Enzymes [BR:ola01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     101174573 (rnf103)
Ubiquitin system [BR:ola04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    101174573 (rnf103)
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-C3HC4_2 zf-rbx1 zf-C3HC4 zf-RING_UBOX zf-ANAPC11 zf-RING_5 zf-C3HC4_3
Other DBs
NCBI-GeneID: 101174573
NCBI-ProteinID: XP_004086548
UniProt: A0A3B3IMD8
Position
10:complement(4520214..4525923)
AA seq 660 aa
MWLKLFFLLLYFVVLFVLSRIFEAVVWYETGVFATQLVDPVTLSYKKLKTILESRGLGHP
GLPGGKDVSELVEKSGELTQGELYSAMKKEKEQSEAGDVETTLFNGEAHFYELVEDTKDG
IWLVQVIAQNREAPLSKSSWGKVVQKVSQFGIRTGTFNCSSDHRSCIKRGWQRSTLVMSA
PQTSASKGKVMLKEYDGWRMDTEHIFRWITSHVAHRIKTLRRSDQLMEEWRSDSDHPVKM
FLFARLPQPPAFFSSLSVKFTGRIDFIFVDVCRWSNFSSLSAIGVTRSPAYILKMPEGTY
HYGNSFGEFLSLASMDVFLRSVQPEVNDLFVLSLLLINLLAWMDLFITQGATVKRFVVLI
RTLGTYNSILLVSWLPVLALLQLPYLDSLYGYSLKLLRYADTTTLASLVRADWIFYSSHP
ALFLSTYLAHGLLVDYFEKKRRCGSRSQEDSSTNLEWLASLWDWYASYLLHPITSFQQVP
SDLSDWEDDPSFLFERLAFPDLWLRPLVNMDYMKALPTWRLSVDTPSPPAGPCRDGSKGP
PPLGHHDYSVSTGLAPHSGCHKEGASSSSSVNRKPEDGGGGVSGRELCDCSEWPPSVLPC
SECVVCLENFEGGELLMGLPCGHAFHQHCIVVWLAAGRHCCPVCRWPSYKKKSAVTPPLD
NT seq 1983 nt   +upstreamnt  +downstreamnt
atgtggctgaagctcttcttcctgctgctgtacttcgtggttctgttcgtgctgagccgg
atcttcgaggcggtggtctggtatgagaccggcgtgttcgccacgcagctcgtggacccg
gtcacgctgagctacaagaagctgaagaccatcctggagagccggggactcggacacccc
ggactgcccggggggaaggacgtcagcgagctggtggagaagtccggagagctgacccag
ggggagttatactcggccatgaagaaggagaaggagcaatcggaggctggagatgttgaa
accactctcttcaacggggaggcgcacttctacgagctggtggaggacaccaaagacggc
atctggctggttcaggtcatcgcccagaatcgagaagctccgctcagcaagtccagctgg
gggaaggtggttcagaaagtgtcccagtttgggataagaactggaaccttcaactgctcc
agtgaccacaggtcgtgcataaagcgaggctggcagcgctccaccctggtcatgtcggct
ccgcagacgtcagcgtcaaaaggaaaggttatgctgaaagaatacgacggatggcgcatg
gacacggagcacatctttcgctggatcacatcccacgtggcccaccggatcaagacactg
cgccgctccgaccagctgatggaggagtggcgctctgactcggatcaccccgttaagatg
tttctgttcgcccgcctgccgcagccgcctgcctttttttcctcgctgtccgtcaaattc
accggcaggattgacttcatctttgtggacgtctgtcgctggagcaacttcagcagccta
tcggctattggtgtgacacgaagccccgcctacattctgaagatgcctgaaggcacctat
cactatggcaacagttttggggagttcctgtccctggcgtccatggacgtgttcctgcgc
tcggtccagcctgaagtcaacgacctgtttgtgctcagtctgctgctcatcaacctgctg
gcctggatggatctcttcatcactcagggagcaactgttaaacgatttgtggttctgatc
cgaactctgggaacctacaactccatcctgctggtgtcttggcttcccgtgctggccctg
ctgcagctgccctacttggactctctgtatggttacagcctgaagctgctgcgttacgcc
gacaccaccacgctggccagtttggtgagagccgattggatcttctactcgtcccaccct
gctctcttcctgtccacgtacctggcccacggcctgctggtggactactttgagaagaag
cggcgctgcggatccaggagccaggaggacagctccaccaatctggagtggctggccagc
ctgtgggactggtacgcctcctatctgctgcaccccatcacctccttccagcaggttccg
tcggacctgtcggactgggaggatgatcccagcttcctgttcgagcgcctggcatttccg
gacctatggctccgccccttagtgaatatggactacatgaaggctttacccacctggagg
ctgtcggtggacaccccctcacctcctgcaggtccctgcagagacggcagtaaaggcccg
ccccctttaggccaccacgactacagtgtgtctaccggtttggcgccccacagtggctgt
cacaaagaaggagcatcatcatcatcatcagtcaacagaaagcctgaggatggaggaggg
ggcgtgtccggccgggagctctgtgattgttcggagtggcccccttctgtcctgccgtgc
tccgagtgcgtggtgtgtctggagaactttgagggcggcgagctgctgatggggctgccc
tgtggccacgccttccaccagcactgcatcgtggtgtggctggccgccggcaggcactgc
tgcccagtatgccgctggcccagctacaagaagaagagtgccgtaaccccccctctggac
tga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (56)   

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