KEGG   Oryzias latipes (Japanese medaka): 110015347
Entry
110015347         CDS       T02443                                 
Name
(RefSeq) E3 ubiquitin-protein ligase makorin-1 isoform X1
  KO
K15687  E3 ubiquitin-protein ligase makorin [EC:2.3.2.27]
Organism
ola  Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:ola00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ola04121]
    110015347
Enzymes [BR:ola01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     110015347
Ubiquitin system [BR:ola04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    110015347
SSDB
Motif
Pfam: zf-CCCH_4 zf-CCCH zf_CCCH_4 Torus zf-RING_2 zf-CCCH_3 zf-C3HC4 zf-RING_UBOX zf-rbx1 zf-CCCH_2 zf-C3HC4_4 zf-RING_5 zf-RING_11 zf-C3HC4_2
Other DBs
NCBI-GeneID: 110015347
NCBI-ProteinID: XP_020560274
Position
7:complement(11235997..11241452)
AA seq 355 aa
MESARNGAVCRHFLKGTCRYGPRCIYRHEWPVMPPSQICRYFQKGNCWYGDRCRYLHVLL
PNMDPTLTSRRSSVPAVSSSSSVASASLERSGSEPALPQNAASMQEFSAPESTSNLSNRQ
PIHRLPENISEEQSHETGFAITQSSEVSHASASHGRAKVVEESSQEQLNEAAGTSSDSSE
VEEIEAILQSKDMTCGICMDKVYERTDARERVFGILPNCNHSFCLQCILTWRKTKGFGSD
VVRACPQCRVKSAFYVPNKYWVEGQAKESVISAFKKKCSKKRCCFYDRYGYCPFKTECLY
RHVKKSNPLPFLYLSDDEDDDGQDLLSLFIMMSLLGADEDSDDDFPFYVTGEFGF
NT seq 1068 nt   +upstreamnt  +downstreamnt
atggagtcggctcgaaatggtgccgtttgtagacatttccttaaaggcacctgtcgctat
gggccaagatgcatctaccgtcacgaatggccagtcatgccaccatcccagatatgcagg
tattttcagaaaggcaactgctggtatggtgaccgatgcaggtatctccatgtacttctg
cccaacatggacccaactttaacatctagaaggagttcagtgccggccgtctcctcctcc
tccagtgttgcttccgcttcacttgaacgaagtgggtcggaaccagcactcccacagaac
gctgcttccatgcaggaattcagcgcgcctgagtcaacgtctaatctctcaaaccgtcag
cctattcaccgcttaccagaaaatatatcagaggagcagtcacacgaaaccggttttgcg
attactcagagctcagaagtttcacatgcaagtgcaagtcatggcagggctaaggttgta
gaagagtcgtctcaggagcaactcaatgaggctgctggcacctccagtgacagtagtgaa
gtggaggaaattgaggccattctgcagagtaaagacatgacttgtggcatctgtatggat
aaggtgtatgagagaacggatgcaagagaacgtgtttttggcatcttgccaaactgcaat
cattccttctgtctgcaatgcatcttgacttggaggaaaacaaaaggatttgggtcggat
gttgtaagggcatgcccacagtgcagagtaaagtctgctttttatgtgccaaacaaatac
tgggttgaaggacaagcaaaggaaagtgttatttctgcatttaagaagaagtgcagtaag
aaaagatgctgcttctatgaccgatacggatactgtcccttcaaaacggagtgcctttat
cggcatgttaaaaaatcaaatcctctcccatttttgtatctgtctgacgatgaagatgat
gacggtcaagatctcctaagtcttttcataatgatgtcccttcttggtgctgatgaggat
tcagatgatgactttccgttttacgtgactggagagtttgggttttga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (14)   
   Pfam (14)   
All databases (59)   

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