KEGG T04016: ADJ70

Olsenella sp. oral taxon 807: ADJ70_09410

Entry

ADJ70_09410       CDS       T04016

Name

(GenBank) DEAD/DEAH box helicase

K11927

ATP-dependent RNA helicase RhlE [EC:5.6.2.7]

Organism

olo Olsenella sp. oral taxon 807

Pathway

olo03018

RNA degradation

Brite

KEGG Orthology (KO) [BR:olo00001]
09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ADJ70_09410
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:olo03019]
    ADJ70_09410
Enzymes [BR:olo01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     ADJ70_09410
Messenger RNA biogenesis [BR:olo03019]
Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     ADJ70_09410

SSDB

Motif

Pfam:

DEAD Helicase_C ResIII HEM4 AAA_22

Other DBs

NCBI-ProteinID:

AKT49992

UniProt:

A0A0K1F5J8

Position

complement(553907..555415)

AA seq 502 aa
MGYGTPTPIQAWSIPLILAGRDVMASAQTGTGKTAAFLLPALDRLGHDRTGRGPSMLVVT
PTRELAQQIDDAAQDICAYTHHSTVVLVGGVSYEGQREALNRGCDLLVATPGRLLDLMAQ
GEASLDHVQVLVLDEADRMLDMGFLPDVRRIVAATPESRQTLLFSATLSRDVLTDTRSLV
HDPALVEIAPRGTAAEAVEQYAVAITPKAKSRALVELLNHEGAERVIVFCRGKHRADGIC
RRLRKAGFSCAPIHGNRSQNQRERALLGFRTGEIDILVATDVLSRGIDIPEVAYVVNFDV
PGDAEDYIHRIGRTGRAGQTGWALTFVTEEDYLDLRDAEALMGRVIPEFPRIEELDAGPE
WERNFMDPRRDPHERLPGKKARKRMAEKREATRRASDSGAKAQGPKPSEGHTSASPTPAD
DRQTVAADAAWERDEPTRKKSKGKKKGRGRDRRKAATKGGGARLGASDNEYGPGNKPTSI
PAPRGRRRPGDRGGHLSTRDSD

NT seq 1509 nt +upstreamnt +downstreamnt
atgggctatgggacgccaacccccatccaagcgtggtccatccccctcatcttggcaggc
cgagacgtcatggcatccgcacagacgggcacaggaaagactgcggccttccttttgccg
gcactcgaccgtctgggacacgaccgcacagggcgaggtccctcgatgctcgtggtaacc
cctacccgcgagctcgcccagcaaatcgatgacgccgcgcaggacatctgtgcctacaca
catcacagcaccgtggtgctcgtgggcggcgtgagctacgaggggcagcgcgaggccctc
aatcgaggttgcgaccttctcgtcgcgacgcccgggcgcctcctcgacctcatggcccag
ggcgaggcgagcctcgaccacgtgcaggtgctcgtgctcgatgaggcagatcgcatgcta
gacatgggctttctccctgacgtgaggaggattgtcgcagccacgcccgaaagccgccag
acactgctcttctcggcgacactcagcagggacgtacttacagacacccgctcgctcgtg
cacgatcctgcgctcgttgagatcgcgcccagaggaactgcggccgaggcagtcgagcag
tacgccgtagccatcacccccaaggctaagagcagggccctcgtcgaactgctgaaccat
gagggcgccgagcgtgtcatcgtgttctgtcgaggcaagcaccgtgccgatggcatctgc
cgacgcttgcgaaaggcagggttctcatgtgctcccatccatggaaaccgcagccaaaac
cagcgcgagcgagcactcctcggctttcgcaccggtgagatcgacatactcgtggcaacc
gacgtgctatcacgaggcatcgacattcccgaggtcgcctacgtcgtgaacttcgacgtc
cctggcgatgccgaggactacatccaccgcatcggacgcacgggacgcgcgggccagacg
ggctgggccctcacgtttgtgacggaagaggactacctcgatcttcgggacgccgaggca
ctcatgggccgcgtgatacccgagtttccacgcatcgaggaactcgacgcgggcccagag
tgggagcgaaacttcatggacccaaggcgcgacccccatgagaggctccccggcaagaag
gcgcgcaagaggatggccgagaaacgcgaggcaacacgcagggcaagcgacagcggtgcc
aaggcccaaggacccaagccgtcagaagggcacacgagtgcctcccccacacccgctgac
gataggcagactgtagcggcggacgcagcctgggaacgtgacgagccaactcgcaagaag
tccaagggaaagaagaagggacgtggcagggaccgcagaaaggccgccacaaaaggcgga
ggggcccgtcttggcgcgtcggacaacgagtacggtcccggcaacaagccaacgtcgatt
cctgcgccgcgcggcagacgtcgccctggtgaccggggagggcacctgagcactcgagac
agtgattga

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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