KEGG   Ostreococcus lucimarinus: OSTLU_31250
Entry
OSTLU_31250       CDS       T01029                                 
Name
(RefSeq) predicted protein
  KO
K14015  nuclear protein localization protein 4
Organism
olu  Ostreococcus lucimarinus
Pathway
olu04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:olu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    OSTLU_31250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:olu03009]
    OSTLU_31250
Ribosome biogenesis [BR:olu03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    OSTLU_31250
SSDB
Motif
Pfam: NPL4 UN_NPL4 OTU1_UBXL DWNN ubiquitin Crinkler JAB
Other DBs
NCBI-GeneID: 5001228
NCBI-ProteinID: XP_001417539
JGI: 31250
UniProt: A4RW87
Position
4:complement(565983..567233)
AA seq 416 aa
MIVRVRTRDGTERITVPSSDITVAKLKEILETELKVPKDEQILSTSLDVLTSKTPEEFKD
MANGRAKIASCGIDTNGAVVHLMYGCEREPTKTTAAVRDAARGLTGRKMTVDDMIAAQVR
IERQEAPHCVSVSFDANAANVFQSYVNYTLGFKQVRFGWLYGARDDDGKTRVDAIYEPEQ
EGTEEDVEVLEDTLEDEKADALAGALGMIRVGCIISTPKDERDFTLSAREVSRVARLQSK
FGKEFVTAVVSTFEDEDDNWQVSFEAFQLSDAAMKVQERGWFTGECGVDEDGDELKGVSK
LTNEVIVRDGPSINDVNAVDNDMFLVTVPILDHEGAISTTFPVENRLHPVQTVDDLKDAL
RKDKPYGERLRDFHLLLFLAKHIDINELAVIASAVHHGEDVPEGYTLLIDCLAGLA
NT seq 1251 nt   +upstreamnt  +downstreamnt
atgatcgtccgcgtgcgcacgcgcgacggtaccgaacgcatcacggtcccttcctccgac
atcaccgtcgcgaaactcaaagaaatcctcgaaaccgagctgaaagtgccgaaagacgag
cagattctctcgacgtcgctcgatgtgctgacgagcaaaacaccggaagaattcaaagat
atggcgaacggaagggcgaagatcgcgtcgtgcggaatcgacacgaacggggcggtggta
cacttgatgtatgggtgcgaaagagagccgacgaagacgacggcggcggtgcgggacgcg
gcgagaggactcacgggacgaaagatgaccgtcgacgacatgatcgcggcgcaagtacgg
atcgaaaggcaagaggcgccgcactgcgtgagcgtgtcgttcgatgcgaacgcggcgaat
gtgtttcagagctacgtgaattatacgttgggatttaaacaggtgaggttcggatggttg
tacggcgcgcgagacgacgacgggaagactcgggtggacgcgatttacgagccagagcaa
gagggcacagaggaagatgtggaggtgttggaagacacgctcgaggatgaaaaggcggac
gcgctcgcgggtgcgttgggaatgatccgtgtggggtgcataatcagtacgccgaaggat
gaacgcgactttacgctgagcgcgagagaggtgtcgcgcgtcgcgcggttgcagtcaaag
ttcggcaaggagtttgtcaccgccgtggtgagcacgttcgaagacgaagacgacaactgg
caggtgtctttcgaggcatttcagctgagtgatgcggcgatgaaggttcaggagcgtggt
tggttcaccggtgagtgcggcgtcgacgaggatggagacgagttgaagggagtatccaag
ctcacgaacgaggtcatcgtgcgtgacggtccgagcatcaacgacgtgaatgcagttgat
aacgacatgtttctcgtcaccgtgccgatcttggaccacgaaggcgcgatttcaactacg
tttcccgtcgagaaccgtttgcatcccgtgcaaaccgtcgacgatttaaaggacgcattg
cgcaaagacaaaccgtacggagaacgattgcgcgatttccacttactcttgttcttggcg
aagcacatcgatatcaacgaattagctgttattgcaagcgcggtgcatcacggcgaagac
gttccggagggctacacgttactcattgattgtttggctggtctggcgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (41)   
   KEGG ORTHOLOGY (1)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (55)   

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