KEGG   Oryzias melastigma (Indian medaka): 112147414
Entry
112147414         CDS       T07439                                 
Symbol
toe1
Name
(RefSeq) target of EGR1 protein 1
  KO
K13202  target of EGR1 protein 1
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oml03041]
    112147414 (toe1)
Spliceosome [BR:oml03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    112147414 (toe1)
SSDB
Motif
Pfam: CAF1 zf-CCCH zf_CCCH_4
Other DBs
NCBI-GeneID: 112147414
NCBI-ProteinID: XP_024129548
Ensembl: ENSOMEG00000014153
Position
LG17:21555498..21561362
AA seq 507 aa
MTDSMVVPVIDVHSGNFKELWPALVVAIKTSSFIALDTELSGLGNRKSLLAESIEDRYKA
ICHAARSRSILSLGFACFKKLDHKNPDTYLVQVYNLTLLCSEEYIIEPQSVQFLVQHGFD
FNKQYSHGITYCKGNNRGGSDDRGIHIRALFTELLRARKPLVLHNGLIDIAFLYQSFYAH
LPERLVTFTADLSDMFPAGIYDTKYITEFELRLTASYLEYAYKKCKLDNSRGLSSGTPGP
HLHIDFCQYAGHMSTYVDYRECPAVASSEEQTEVCQRFSAFGWCPNGTKCPLSHDTDLIV
LQDEKCKDDKRKKRKRQREKRRAGGESAEGSSIFEGAPLNKIPNMEVDADGDKPNTTTET
RREDLPHDDSQTTLDEAQSENAEKDDKAELNCPTTSTVDESKMEDGSNEQLRGRPAEAQK
KKADAGTHRAGFDAYMTAYIFAFSCALSKKENSEGGENKKEQSWLPACLNKVYLSGKAAP
LNVVKSTFAKSSKAHLEKMEMVWGGSM
NT seq 1524 nt   +upstreamnt  +downstreamnt
atgactgattcaatggtcgttcctgttattgatgtacatagtgggaactttaaggagcta
tggccagctctggtggttgctatcaaaacgtcaagctttattgcactggacactgagctc
agtggtttgggaaacaggaaatcccttctggctgaatctattgaagacagatataaggcc
atttgccatgctgcccgctctcgctccatcctctcgctgggatttgcgtgtttcaagaaa
ctagaccacaagaatcctgacacatacctggtgcaggtgtataatctcaccttgctgtgt
tctgaggagtacatcatagagccacagtcggtgcagttcctggtgcagcacggctttgac
tttaacaagcagtacagccatggaatcacttactgcaagggcaacaacaggggaggatca
gatgatcgggggatccacatccgggcgttgttcactgaactgctgcgtgccagaaaaccg
ctggtgctacataacggcctcatcgacattgccttcctttaccagagtttttacgcccac
ctcccagagcgcctggtcaccttcactgcagacctgtccgacatgtttcctgctggcatt
tacgacaccaaatacataacggagtttgagctccggctcaccgcctcctacctggaatac
gcctacaaaaaatgtaagctggataacagccgcggtctcagctcgggaacgcctggacct
cacctccacatcgacttctgtcagtatgcaggtcacatgtccacgtatgtggattacaga
gagtgtccggcggtggcgtcctccgaggaacagactgaagtctgccagcgcttctctgct
ttcggctggtgtcccaatggcacaaagtgtccgttatcccacgacaccgacctgatcgtt
ctccaggatgaaaaatgcaaagacgacaagagaaagaagaggaagagacagagagagaaa
aggagagctggaggagaaagtgcagaggggtcttccatcttcgagggcgcccccttaaac
aaaataccaaacatggaggtggatgcagatggtgacaagccgaacacgacaaccgagaca
cggcgagaggatttgccacatgacgacagtcagaccacattggatgaagcgcagagcgag
aacgccgaaaaagacgacaaagctgaacttaactgtccgacaacgagcacagtggatgaa
agcaaaatggaagacggaagcaacgaacagctcagaggccgccctgcagaggcccaaaag
aagaaagctgacgcaggcacgcatcgagcggggtttgacgcctacatgacggcttacatt
tttgccttctcctgcgctctctccaagaaggaaaactctgaaggtggtgaaaacaagaaa
gagcagtcgtggcttcctgcctgtctcaataaggtctatctgagcggcaaagcagctcct
ctcaatgtggtcaaaagcacattcgcaaaatcgtccaaagcccatttggagaagatggag
atggtgtggggagggagcatgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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