KEGG   Oncorhynchus mykiss (rainbow trout): 110500360
Entry
110500360         CDS       T07259                                 
Symbol
snapc2
Name
(RefSeq) snRNA-activating protein complex subunit 2
  KO
K15209  snRNA-activating protein complex subunit 2
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:omy03021]
    110500360 (snapc2)
Transcription machinery [BR:omy03021]
 Eukaryotic type
  RNA polymerase III system
   Other transcription-related factors
    snRNA-activating protein complex (SNAPc)
     110500360 (snapc2)
SSDB
Motif
Pfam: SNAPC2 DUF29
Other DBs
NCBI-GeneID: 110500360
NCBI-ProteinID: XP_021433363
Ensembl: ENSOMYG00000041741
Position
21:complement(39154370..39158799)
AA seq 619 aa
MKPPSRSRIQPTRYVNKKTEKTASKRKPKFACTGWSRTEQQVLLRCLNKQNKMTGGIHGA
IDLEALHEKLPKQSREEIQSQLESLMMHVLRAVVGQVKKQRSEQKAALKPIQLWAELAHD
MAGALEEPITSAFAQMLVISATEPGSLTNSDPPREDYLPKQQRSNFKTIPPRPIPTPISP
KTLAPSGVSKSPIVFNIASTPQPPPAVSGVPATQPSTMNPGSGASKQRGRTTTPASTVGA
LPQPGCSNSSILSQIQEGSAISTLLTVPMPVQSLSASLSGPTTTLQSQSVAQGGAHGQTM
SNVPSAQLAVTSSPAPADVSKQQQPSAAASSIRPQPQHPGAGPRKSKHADENTPRYTGLG
SIVDFEKIYRFLSTVHVQSECFKLTPMESAIILDLLMSLPEELPLLDCARLQHHLLQVHE
RFSAPVPKVTQEGTGTGRPWSSAAGDQRRQDGATDGGAILVAVTTPPSLDAGDKVGAPLQ
VQQGSQVEGGRGVAISGMPDGLGSDGMELTSTNQGVAATVVPANLVAGCSNSVAKDGAVP
LQGSTEERAGTETVAPSQDNGQAQGQTPTTNDTSAKSGTATQRKSDWEKAGLCPLNPFMV
PLKLLARKQIQSLDEVVLQ
NT seq 1860 nt   +upstreamnt  +downstreamnt
atgaagccgccctctcgttctcgaatacaaccgacgcgctatgtgaacaagaagaccgaa
aagactgcctcgaagcgaaaaccaaagttcgcttgcacgggatggagtcggacggagcaa
caggtcctgctgcggtgcctcaacaagcagaacaagatgactggcgggattcacggggca
atagacctagaggccctgcacgaaaaacttcccaagcagtccagagaagaaatccagtcc
cagttggagtctctgatgatgcatgtgctgagagcggtggtgggccaggtgaagaagcag
aggtctgagcagaaggcagccctgaagcccatccagctgtgggctgaactggcccatgat
atggctggagctctggaggaacccattacctcagccttcgctcagatgctagttatctca
gccacagagcccggcagcctgaccaactcggacccgcctcgagaagactacctccctaag
caacaacgctccaacttcaagaccataccacctagacccatacccacacctatctcccca
aaaaccctagccccctcaggggtatctaagagccctatagtgtttaacattgcttctaca
ccccaaccaccacctgcagtctctggtgttcctgccacccagccgtccacaatgaacccc
ggttctggcgcgtccaaacagagaggcaggaccactacaccagcctctacggttggagcc
ctaccccagcctggttgctctaactccagcatcctcagtcagattcaagaagggtctgcc
atttccactctgcttacagtaccaatgcctgtacagtccctttctgcctcattgtctggt
cctactacaacactgcagtcccagtcggtggcacaaggtggcgcgcatgggcagaccatg
tccaacgtcccttccgctcagctggcagtgacgtcctctcctgccccagccgatgtgtca
aaacaacaacagccctctgctgcagcctcctctattaggccgcagcctcagcatcccggg
gctgggccaaggaaaagtaaacatgcggatgagaacacacctagatacacaggcctgggg
agcattgtggactttgagaaaatctatcggttcttaagtacggtccatgtgcagagtgaa
tgcttcaaactgactcctatggaaagtgctataatactggacctgctgatgtctctgcct
gaagagctccccctcctggactgtgccagactgcagcaccacctgctccaggtccatgaa
cggttctcagccccggttcccaaagtgacccaggagggcactggtactgggaggccctgg
tcctcagcagcgggagatcaaagaagacaagatggagcaacagatggaggagcaatactt
gttgctgtgacaacgcccccaagtctagatgctggtgacaaggtgggggccccacttcaa
gtacaacaggggagtcaggtagaaggaggaagaggtgtggctattagtggaatgccagat
ggtctgggaagtgatgggatggaattaacctcaaccaatcagggtgtggctgcaacggtg
gtgcctgccaacctggtcgccgggtgttccaattccgttgctaaggatggggctgtgccg
ttgcaggggagtacagaggaaagagcgggaactgagactgttgcgccttcacaggacaat
ggacaagcccagggacaaacgcccacgaccaatgacacgtcagcaaagtcagggacggct
acgcaaagaaaatctgactgggagaaggcgggactctgtccccttaaccccttcatggtg
cctttgaaactgttggcacggaaacagatccagtcgctggacgaggttgtgttacagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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