KEGG   Orcinus orca (killer whale): 101281735
Entry
101281735         CDS       T05247                                 
Symbol
TRIM23
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM23 isoform X1
  KO
K07963  tripartite motif-containing protein 23 [EC:2.3.2.27]
Organism
oor  Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:oor00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oor04121]
    101281735 (TRIM23)
  09183 Protein families: signaling and cellular processes
   04031 GTP-binding proteins [BR:oor04031]
    101281735 (TRIM23)
Enzymes [BR:oor01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     101281735 (TRIM23)
Ubiquitin system [BR:oor04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    101281735 (TRIM23)
GTP-binding proteins [BR:oor04031]
 Small (monomeric) G-proteins
  Arf/Sar Family
   Others
    101281735 (TRIM23)
SSDB
Motif
Pfam: Arf Roc Ras SRPRB G-alpha zf-RING_UBOX zf-RING_5 Gtr1_RagA zf-B_box MMR_HSR1 zf-RING_2 zf-C3HC4 CEBP_ZZ
Other DBs
NCBI-GeneID: 101281735
NCBI-ProteinID: XP_004270797
Position
3:133290614..133332733
AA seq 574 aa
MATLVVNKPGAGLDSGRQGSRGTAVVKVLECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL
TRLPLHGRAIRCPFDRQVTDLGDSGVWGLKKNFALLELLERLQNGHIGQYGAAEEAIGIS
GESIIRCDEDEAHVASVYCTVCATHLCSECSQVTHSTKTLAKHRRVPLADKPHEKTMCSQ
HQVHAIEFVCLEDGCQTSPLMCCVCKEYGKHQGHKHSVLEPEANQIRASILDMAHCIRTF
TEEISDYSRKLVGIVQHIEGGEQIVEDGIGMAHTEHVPGTAENARSCVRAYFSDLHETLC
RQEEMALSVVDAHVREKLIWLRQQQEDMTILLSQVSTACLHCEKTLQQDDCRVVLAKQEI
TRLLETLQKQQQQFTEVADHIQLDASIPVTFTKDNRVHIGPKMEIRVVTLGLDGAGKTTI
LFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHKLRPLWKHYYLNTQAVVFVVD
SSHRDRVSEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEEITELLSLHKLCCGRS
WYIQGCDARSGMGLYEGLDWLSRQLVAAGVLDVA
NT seq 1725 nt   +upstreamnt  +downstreamnt
atggctaccctggttgtaaacaagcctggagcgggactagacagtggtcgtcagggcagc
cgggggacggccgtggtgaaggtgctggagtgtggagtttgtgaagatgtcttttctttg
caaggagacaaagttcctcgccttctgctttgtggccacacagtctgtcatgactgtctc
actcggctgcctcttcacggaagagcaatccgttgcccttttgatcgacaagtaacagac
ctaggagattcaggtgtctggggattgaaaaaaaattttgctttattggagcttttggaa
cgactacagaatggacatattggtcagtatggagctgcagaagaagccattgggatatct
ggagagagcatcattcgttgtgatgaagatgaagctcacgttgcatctgtatattgcact
gtatgtgcaactcacttgtgctcagagtgttcccaagttacccattcaacaaagacatta
gcaaagcacaggagagtgcctctagctgataaacctcatgagaaaaccatgtgctctcag
catcaggtgcatgccattgagtttgtttgcttggaagatggctgtcaaactagcccactc
atgtgctgtgtctgcaaagaatatggaaaacaccaaggtcacaagcattcagtattggaa
ccagaagctaaccagatccgagcatcaattttagatatggctcattgcatacggaccttc
actgaggaaatctcagattattccagaaaattagttggaatcgttcagcacattgaagga
ggagaacaaatagtggaagatggaattggaatggcccacacagaacatgtaccaggtact
gcggagaatgcccggtcatgtgtccgagcttatttttctgatctacatgaaactctgtgt
cgtcaagaagaaatggctctaagtgttgttgatgctcatgttcgagaaaaactgatttgg
ctcagacagcagcaagaagatatgactattttgttatcccaggtttcaacagcctgtctc
cattgtgaaaagactttgcaacaggatgattgtagagttgtcttagcaaaacaagaaatt
acaaggttactggaaacattgcaaaagcagcagcagcagtttacagaggttgcagatcac
attcagttagatgccagcatccctgtcacttttacaaaggacaatagagttcacattgga
cccaaaatggaaattcgagttgttacgttaggattagatggtgctggaaaaactactatt
ttgtttaaattaaaacaggatgagttcatgcagcctattccaacaattggttttaatgtg
gaaactgtagaatataaaaatctaaagttcaccatttgggatgtaggtggaaaacataaa
ttaagaccattgtggaaacattattacctcaatacccaagctgttgtatttgttgttgat
agcagtcatagagacagagttagtgaagcacacagtgaacttgcaaagttgttaacagaa
aaagaactccgagatgctttgctactgatttttgctaacaaacaggacgttgctggagct
ctgtcagtagaagaaatcactgaacttcttagtctccataaattgtgctgtggccgaagc
tggtatattcagggctgtgatgctcgaagtggtatgggactgtatgaagggttggactgg
ctctcacggcaacttgtggctgctggagtattggatgttgcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (13)   
   Pfam (13)   
All databases (34)   

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