KEGG   Orcinus orca (killer whale): 101283224
Entry
101283224         CDS       T05247                                 
Symbol
SOX5
Name
(RefSeq) transcription factor SOX-5 isoform X2
  KO
K09269  transcription factor SOX5/6/13 (SOX group D)
Organism
oor  Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:oor00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:oor03000]
    101283224 (SOX5)
Transcription factors [BR:oor03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    101283224 (SOX5)
SSDB
Motif
Pfam: HMG_box HMG_box_2
Other DBs
NCBI-GeneID: 101283224
NCBI-ProteinID: XP_004270961
Position
11:complement(18903743..19895762)
AA seq 763 aa
MLTDPDLPQEFERMSSKRPASPYGEADGEVAMVTSRQKVEEEESDGLPAFHLPLHVSFPN
KPHSEEFQPVSLLTQETCGHRTPTSQHNTMEVDGNKVMSSFAPHNSSTSPQKAEEGGRQS
GESLSSTALGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAM
GSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMEL
AKQQQEQIARQQQQLLQQQHKINLLQQQIQVQGQLPPLMIPVFPPDQRTLAAAAQQGFLL
PPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPGGKLPGI
PQGNLGAAVSPTSIHTDKSTNSPPPKSKDEVAQPLNLSAKPKTSDGKSPTSPTSPHMPAL
RINSGAGPLKASVPASLASPSARVSTIGYLNDHDAVTKAIQEARQMKEQLRREQQVLDGK
VAVVNSLGLNNCRAEKEKTTLESLTQQLAVKQNEEGKFSHAMMDFNMSGDSDGSAGVSES
RIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNL
EKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYF
NVGQQAQIPIATAGVVYPGAIAMAGMPSPHLPSEHSSVSSSPEPGMPVIQSTYGVKGEEP
HIKEEIQAEDINGEIYDEYEEEEDDPDVDYGSDSENHIAGQAN
NT seq 2292 nt   +upstreamnt  +downstreamnt
atgcttactgaccctgatttacctcaggagtttgaaaggatgtcttccaagcgaccagcc
tctccgtatggggaagcagatggagaggtagccatggtgacaagcagacagaaagtggaa
gaagaggagagtgacgggctcccagcctttcaccttcccttgcatgtgagttttcccaac
aagcctcactctgaggaatttcagccagtttctctgctgacgcaagagacttgtggccat
aggactcccacttctcagcacaatacaatggaagttgatggcaataaagttatgtcttca
tttgccccacacaactcatctacctcacctcagaaggcagaagaaggtgggcgacagagt
ggcgagtccttgtctagtacagccctggggactcctgagcggcgcaaaggcagcttagct
gatgttgttgacaccttgaagcagaggaagatggaagagctcatcaaaaatgagccagaa
gaaacccccagtattgaaaagctactatcaaaggactggaaagacaagcttcttgcaatg
ggatcagggaactttggtgaaataaaagggactcccgaaagcctcgctgagaaggagaga
cagctcatggggatgatcaatcagctaaccagtctgcgagagcagctgttggctgcccat
gatgagcagaagaaactggctgcatctcagattgagaaacagcgccagcaaatggagctg
gccaagcagcagcaagaacagattgcaagacaacagcagcagcttctgcagcaacaacac
aaaatcaatttgcttcagcaacagatccaggttcaaggtcaactgccgccattaatgatt
cctgtattccctcccgatcaacggacactggctgcagctgcccagcaaggattcctcctt
cctccaggcttcagctataaggctggatgtagtgacccttaccctgtacagctgatccca
actaccatggcagctgctgctgcagcaacaccaggcttaggcccactccaactgcagcag
ttatatgctgcccagctagctgcaatgcaggtatctccaggaggaaagctcccaggcata
ccccaaggcaaccttggtgctgctgtatctcctaccagcattcacacagacaagagcaca
aacagcccaccacccaaaagcaaggatgaagtggcacagccactgaacctatcagctaaa
cccaagacctctgatggcaaatcacccacatcacccacctctccccatatgccagctctg
agaataaacagtggggcaggccccctcaaagcctctgtcccagcatcattagctagtcct
tcagccagagttagcacaataggttatttaaatgaccatgatgctgtcaccaaggcaatc
caagaagctcggcagatgaaggagcagcttcggcgggaacaacaggtgcttgatgggaag
gtggctgttgtgaatagtctaggtctcaataactgccgagcagaaaaggaaaaaacaaca
ctggagagtctgactcagcaactggcagttaaacagaatgaagaaggaaaatttagccat
gccatgatggatttcaatatgagtggagattctgatggaagtgctggagtctcagaatca
agaatttatagagaatccagggggcgtggtagcaatgaaccccacataaagcgtccaatg
aatgccttcatggtgtgggctaaagatgaacgaaggaaaatccttcaggcctttcctgac
atgcacaattccaacatcagcaagatactgggatctcgctggaaagctatgacaaaccta
gagaaacagccatattatgaggagcaagcccgtctcagcaagcagcacctggagaagtac
cctgactacaaatacaagcccaggccgaagcgcacctgcctggtggatggcaaaaagctg
cgcatcggggaatacaaggcaatcatgcggaacaggcggcaggaaatgcggcaatacttc
aacgttgggcaacaagcacagatccccatcgccactgctggtgtcgtgtaccctggagcc
atcgccatggctggaatgccctcccctcatctgccctcagagcactcaagcgtgtccagc
agcccggagcctgggatgcctgttatccagagcacttacggcgtgaaaggagaggagcca
catatcaaagaagagatccaggctgaggacatcaacggagaaatttatgatgagtacgag
gaggaagaggatgatccagatgtagattatgggagtgacagtgaaaaccatattgcagga
caagccaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (12)   
   RefSeq(pep) (12)   
DNA sequence (12)   
   RefSeq(nuc) (12)   
Protein domain (2)   
   Pfam (2)   
All databases (38)   

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