KEGG   Orcinus orca (killer whale): 101285119
Entry
101285119         CDS       T05247                                 
Symbol
PSMC1
Name
(RefSeq) 26S proteasome regulatory subunit 4
  KO
K03062  26S proteasome regulatory subunit T2
Organism
oor  Orcinus orca (killer whale)
Pathway
oor03050  Proteasome
oor05010  Alzheimer disease
oor05012  Parkinson disease
oor05014  Amyotrophic lateral sclerosis
oor05016  Huntington disease
oor05017  Spinocerebellar ataxia
oor05020  Prion disease
oor05022  Pathways of neurodegeneration - multiple diseases
oor05165  Human papillomavirus infection
oor05169  Epstein-Barr virus infection
oor05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:oor00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    101285119 (PSMC1)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    101285119 (PSMC1)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    101285119 (PSMC1)
   05165 Human papillomavirus infection
    101285119 (PSMC1)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    101285119 (PSMC1)
   05012 Parkinson disease
    101285119 (PSMC1)
   05014 Amyotrophic lateral sclerosis
    101285119 (PSMC1)
   05016 Huntington disease
    101285119 (PSMC1)
   05017 Spinocerebellar ataxia
    101285119 (PSMC1)
   05020 Prion disease
    101285119 (PSMC1)
   05022 Pathways of neurodegeneration - multiple diseases
    101285119 (PSMC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:oor03051]
    101285119 (PSMC1)
Proteasome [BR:oor03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     101285119 (PSMC1)
SSDB
Motif
Pfam: AAA Prot_ATP_ID_OB_C AAA_lid_3 AAA_2 AAA_22 nSTAND3 DUF815 AAA_5 RuvB_N AAA_16 AAA_25 AAA_28 AAA_14 RNA_helicase AAA_3 ATPase IstB_IS21 TIP49 AAA_11 AAA_18 Mg_chelatase Prot_ATP_ID_OB_N AAA_7 AAA_33 Parvo_NS1 NB-ARC PhoH NACHT AAA_24 AAA_30 TsaE
Other DBs
NCBI-GeneID: 101285119
NCBI-ProteinID: XP_004262379
Position
2:188067021..188080223
AA seq 440 aa
MGQSQSGGHGPGGGKKDDKDKKKKYEPPVPTRVGKKKKKTKGPDAASKLPLVTPHTQCRL
KLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH
AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP
QETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVA
NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG
GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT
KKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK
KSKENVLYKKQEGTPEGLYL
NT seq 1323 nt   +upstreamnt  +downstreamnt
atgggtcagagtcagagtggtggtcatggtcctggaggtggaaagaaggatgacaaggac
aagaaaaagaaatatgaacctcctgtaccaaccagagtggggaaaaagaagaagaaaaca
aagggaccagatgctgccagcaaactgcccctggtgacacctcacactcagtgccggtta
aaattattgaagttagagagaattaaagactatcttctcatggaggaagaattcattaga
aatcaggaacaaatgaagcctttagaagaaaagcaagaggaggaaagatcaaaggtggat
gatctgagggggaccccaatgtcggtaggaaccttggaagagatcattgatgacaatcat
gccatcgtgtctacgtctgtgggctcagaacactatgtcagcattctttcatttgtagac
aaggatctgctggaaccgggctgctcggtcctgctcaaccacaaggtgcatgctgtgata
ggggtgctgatggatgacacggatcccttggtcacagtgatgaaggtggaaaaggccccc
caggagacatatgctgatattgggggcttagacaaccaaatccaggaaattaaggaatct
gtggagcttccactcactcatcctgaatattatgaagagatgggtataaagccccctaag
ggggtcattctgtatggtccacctggcacaggtaaaaccttactagccaaagcagtagca
aaccaaacctcggccactttcttgagagtcgttggctctgaacttattcagaagtaccta
ggtgatgggcccaaacttgttcgggaactgtttcgagttgctgaagaacatgcaccgtcc
atcgtgtttattgatgaaattgatgctattgggacgaaaaggtatgactcaaattccggt
ggtgagagagaaattcagcgaacaatgttggaactgttgaaccagttggatgggtttgat
tcaaggggagacgtgaaagtcatcatggccacaaaccggatagagactttggatccagca
cttatcagaccaggccgcatcgacaggaagatcgagttccccttgcccgatgaaaagacg
aagaagcgcatctttcagatccacacgagcaggatgacactagcagacgacgtaaccctg
gatgacttgatcatggctaaagatgacctctctggtgccgacatcaaggcaatctgtacg
gaagctggtctgatggccttgagggaacgtaggatgaaagtaacaaatgaagacttcaaa
aagtctaaagaaaatgtcctttataaaaaacaagaaggcacccctgaggggctctatctc
tag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (11)   
   KEGG PATHWAY (11)   
Genome (1)   
   KEGG GENOME (1)   
Gene (89)   
   KEGG ORTHOLOGY (1)   
   RefGene (85)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (31)   
   Pfam (31)   
All databases (136)   

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