KEGG   Brucella pseudogrignonensis: A8A54_05810
Entry
A8A54_05810       CDS       T04415                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
ops  Brucella pseudogrignonensis
Pathway
ops03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ops00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    A8A54_05810
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ops03021]
    A8A54_05810
   03400 DNA repair and recombination proteins [BR:ops03400]
    A8A54_05810
Enzymes [BR:ops01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     A8A54_05810
Transcription machinery [BR:ops03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     A8A54_05810
DNA repair and recombination proteins [BR:ops03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      A8A54_05810
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RPOC_hybrid
Other DBs
NCBI-ProteinID: ANG96053
Position
1:complement(1201351..1205553)
AA seq 1400 aa
MNQEVMNLFNPQAPAQTFDSIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGIICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKS
LPSRIGTLLDMTLKDIERVLYFENYIVTEPGLTSLKEHQLLSEEEYMIAVDEFGEDQFTA
LIGAEAIFELLASMDLPNIAADLRVELAETTSELKTKKLMKRLKIVENFMESGNRPEWMI
MKIVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIIRNEKRM
LQEAVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTG
PELKLHQCGLPKKMALELFKPFIYARLDAKGYSSTVKQAKKLVEKERPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPTLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGAPIIVPSQDMVLGLYYLSIVADKEPGEGMVFADMGELQHALE
NKVVTLHTKIKGRFKTVDAEGKPVSKVYDTTPGRMITGELLPKHANVPFDICNQEMTKKN
ISKMIDHVYRHCGQKETVIFCDRIMQLGFAHACRAGISFGKDDMVIPDSKAKIVAETEAL
TTEYEQQYNDGLITQGEKYNKVVDAWGKATDKITEEMMARIKAVEFDPVTGRQKQMNSVY
MMSHSGARGSVNQMRQLGGMRGLMAKPSGEIIETPIISNFKEGLTVNEYFNSTHGARKGL
ADTALKTANSGYLTRRLVDVAQDAIISEVDCGAEIGLTMQPIVDAGQIVAPIGQRVLGRT
ALDPIINPATGEVIVEAGRMIEEKDVEVIEKAGIQSIRIRSALTCETRNGVCAKCYGRDL
ARGTPVNQGEAVGVIAAQSIGEPGTQLTMRTFHLGGTAQVVDSSYLEASYEGTVKLRNRN
VVRNSDGNLVVMGRNMAVLILDSTGKERAVHRVTYGSRLFVDEGDAVKRGQRIAEWDPYT
RPILTEVEGYIEFEDLVDGLSVSETADESTGITKRVIIDWRSTPRGADLKPAMVIKDKSG
KIAKLSKGGEARFLLSVETILSFEPGAHVNAGDVIARLPMESAKTKDITGGLPRVAELFE
ARRPKDHAVIAEIDGTVRFGRDYKNKRRIIIEPNDDTIEPVEYLIPKGKPFHLQDGDVIE
KGEYILDGNPAPHDILAIKGVEALASYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKIE
ITESGDTGYIPGDHVDRIELDEINDRLIEEGKKPGSGNPVLLGITKASLQTPSFISAASF
QETTRVLTEAAVAGKMDTLQGLKENVIVGRLIPAGTGGMTNQIRRIATARDELIIDERRK
STGSSEANVMLADMTNNAAE
NT seq 4203 nt   +upstreamnt  +downstreamnt
atgaaccaagaggtcatgaatcttttcaatcctcaggctccggcacagacgttcgattcc
atcagaatctcgattgccagccctgagaagattctgtcctggtcatacggcgagatcaag
aagccggagacgatcaactatcgtacgttcaagcctgaacgcgatggtctcttctgcgcg
cgtatctttggcccgatcaaggattatgaatgcttgtgcggcaagtacaagcgtatgaaa
tacaagggcattatctgcgaaaagtgcggcgtggaagtcacgctctcgcgcgttcggcgc
gagcgcatgggtcacatcgaactcgcagcgcctgttgctcacatctggtttctgaagtcg
ctgccttcgcgcatcggcacgctgctggacatgacgctcaaggatatcgagcgcgtcctg
tacttcgaaaactacatcgtgaccgaaccaggtctgacttcgcttaaggagcatcagctt
ctttcggaagaagaatacatgatcgctgtcgacgagttcggcgaagatcagttcacggcc
cttatcggtgcagaagctatctttgaactcctggcttcgatggatctgccaaacatcgct
gcagacctgcgcgttgaacttgcagaaaccacttcggaactcaagacgaagaagctgatg
aagcgtctcaagatcgttgagaacttcatggaatccggcaatcgtcctgaatggatgatc
atgaagatcgttccggtcattccaccggatctgcgtcctctggttccactggatggcggt
cgttttgctacgtccgatctcaacgacctttaccgtcgtgtgatcaaccgtaacaaccgt
ctgaagcgtctcattgaactgcgcgctcctggcatcattatccgtaacgaaaagcgtatg
ttgcaggaagctgttgacgcgctgttcgataacggccgtcgtggccgcgtcatcaccggt
gctaacaagcgtccgttgaagtcgctctccgacatgctcaagggtaagcagggtcgtttc
cgtcagaaccttctcggtaagcgcgtcgactattctggtcgttcggttatcgtgaccggt
cctgaactgaagctgcaccagtgcggcctgccgaaaaagatggcgctcgaactcttcaag
ccattcatctacgctcgtcttgacgccaagggttactcctcgactgtcaagcaggcgaag
aagcttgttgaaaaggaacgtccggaagtttgggatattcttgacgaagtgatccgtgag
catccggttcttctgaaccgtgcgcctacgctgcaccgtcttggtattcaggcattcgaa
cccacgctgattgaaggcaaggccattcagctgcatccgctcgtttgtacagcgttcaac
gctgacttcgacggtgaccagatggctgttcacgttccgctgtcgcttgaagctcagctt
gaagcgcgcgtgctcatgatgtcgaccaacaacatcttgcacccagcgaacggcgcacca
atcatcgttccttcgcaggacatggttcttggtctctactatctgtcgattgtggcagac
aaggagccgggtgagggcatggtgtttgccgatatgggcgaacttcagcatgcgcttgaa
aacaaggtcgtcacgctgcacaccaagatcaagggccgtttcaagacggttgatgcggaa
ggcaagcctgtttccaaggtttacgacaccacgcctggtcgcatgatcactggtgagctt
ctgccgaagcacgccaatgtgcctttcgatatctgcaatcaggagatgacgaagaagaac
atctcgaagatgatcgaccacgtctaccgccattgcggccagaaagagacggttatcttc
tgcgatcgcatcatgcagctcggcttcgcccatgcatgtcgcgccggtatttccttcggt
aaggatgacatggtcattccagactcgaaggccaagatcgttgcagaaaccgaagctctg
acgactgaatacgaacagcagtacaatgacggtctgattactcagggcgaaaagtacaac
aaggtcgttgatgcctggggtaaggcgactgacaagatcaccgaagaaatgatggcccgc
attaaggctgttgaattcgatccggtgaccggacgtcagaagcagatgaactcggtctac
atgatgtctcattcgggtgcccgtggttcggtcaaccagatgcgtcagctgggcggtatg
cgtggtcttatggccaagccgtcgggtgaaatcatcgaaaccccgatcatttcgaacttc
aaggaaggcctgacggttaacgaatacttcaactcgacacacggtgcccgtaaaggtctt
gccgataccgcgttgaagaccgctaactcgggttatctgacacgtcgtctcgttgacgtt
gcacaggatgcgattatttcggaagtcgattgcggcgccgaaatcggtctcaccatgcag
ccaatcgttgatgctggtcagatcgttgctccaatcggacagcgcgttctgggccgtacg
gcacttgatccgatcatcaatccagcaaccggcgaagtcatcgtcgaagctggccgcatg
atcgaggaaaaggacgttgaagtcatcgagaaggccggcatccagtcgatccgtattcgt
tcggctctgacctgtgaaacccgtaacggcgtttgcgccaagtgctatggtcgtgacctt
gcacgcggtacgcctgttaaccagggtgaagcagttggcgttatcgctgctcagtcgatc
ggtgagcctggcactcagctgaccatgcgtacgttccaccttggtggtactgcacaggtt
gttgactcgtcttacctggaagcttcgtatgaaggcaccgtcaagctgcgtaaccgcaac
gtggttcgcaactcggatggcaatctcgtggtgatgggccgtaacatggctgttctgatc
ctcgactcgaccggcaaggaacgtgcggttcaccgcgtaacctacggttcacgcctgttc
gttgacgaaggtgatgcagtcaagcgcggccagcgtattgctgaatgggatccgtacacc
cgtccaatcttgacggaagttgaaggttacatcgagttcgaagatctcgttgatggcctt
tcggtttcggaaacagcggacgagtcgaccggtatcacgaagcgcgtcatcattgactgg
cgttcgacaccacgcggtgcggacctcaagcctgctatggtcatcaaggacaagagcggc
aagatcgcgaagctgtcgaagggtggcgaagctcgcttcctgctttcggtagaaacgatc
ctttcgttcgagcctggtgcacatgttaatgctggtgatgttattgcgcgtctgccgatg
gaaagcgcgaagaccaaggatattaccggtggtctgccacgcgttgcggaactgttcgaa
gctcgtcgtccgaaggaccacgccgtcatcgcagagatcgatggtaccgttcgttttggt
cgcgattacaagaacaagcgtcgcatcatcattgagccaaacgacgatacgatcgagcct
gttgagtatctgatccctaagggcaagccgttccatcttcaggatggtgacgttatcgaa
aagggtgaatatatcctcgacggtaacccagcaccgcatgacattctggcgatcaagggc
gttgaagcactcgcttcgtacctcgtgaacgaaatccaggaagtctatcgtttgcagggc
gttctcatcaacgacaagcacatcgaagtgattgttcgtcagatgctgcagaagatcgag
atcacggaatccggtgataccggctacattccgggcgatcacgtggaccgcatcgaactg
gacgaaatcaatgatcgtctgatcgaagaaggcaagaagccaggttcgggtaatccggtt
ctgcttggtattaccaaggcgtcgcttcagactccttcgttcatctcggcggcatcgttc
caggaaaccactcgcgtactcaccgaagctgcagttgcaggcaagatggacacgttgcag
ggtctcaaggaaaacgtcatcgtcggtcgtctcatcccggctggtacaggtggcatgacc
aaccagatccgtcgcattgcaactgctcgcgacgaactgatcatcgacgagcgccgcaag
tcgaccggttcttcggaagccaacgtgatgctggcagatatgaccaacaacgctgccgag
taa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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