KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4330354
Entry
4330354           CDS       T01015                                 
Name
(RefSeq) aspartate--tRNA ligase 2, cytoplasmic
  KO
K22503  aspartyl-tRNA synthetase [EC:6.1.1.12]
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    4330354
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:osa01007]
    4330354
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:osa03016]
    4330354
Enzymes [BR:osa01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.12  aspartate---tRNA ligase
     4330354
Amino acid related enzymes [BR:osa01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   4330354
Transfer RNA biogenesis [BR:osa03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    4330354
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d DUF3682
Other DBs
NCBI-GeneID: 4330354
NCBI-ProteinID: XP_015625264
UniProt: Q0DYK4 Q6ZHC3
Position
2:28113637..28118740
AA seq 549 aa
MSSEPPPDAAAAAASSAGDLAADLSSATISKKQLKKDARKAEKAEKASQRQQQQQPQADA
DDPFAANYGDVPVEEIQSKTISGRVWTEIGGLDEAAAGRSVLIRGAAQAIRPVSKKMAFV
VLRESMSTVQCVLVASADAGVSTQMVRFATSLSKESIVDVEGVVSLPKEPLKATTQQVEI
QVRKIYCINRAIPTLPINLEDASRSEAEIEKAEQAGEKLVRVGQDTRLNYRAIDLRTPAN
QAIFRIQCQVENKFREYFLSKNFVGIHSPKLIAGSSEGGAAVFKLQYNGQPACLAQSPQL
YKQMAICGGFERVFEVGPVFRAENSNTHRHLCEFVGLDAEMEIKEHYFEVCDIIDGLFVA
IFKHLNENCKKELETINRQYPFEPLKYLEKTLKLTYEEGIQMLKEAGTEIEPMGDLNTEA
EKKLGRLVKEKYGTEFFILYRYPLAVRPFYTMPCYDNPAYSNSFDVFIRGEEIISGAQRI
HLPELLTKRATECGIDASTISSYIESFSYGAPPHGGFGVGLERVVMLFCALNNIRKTSLF
PRDPQRLVP
NT seq 1650 nt   +upstreamnt  +downstreamnt
atgtcgtcggagcctccacccgatgccgccgccgccgccgcctcctccgcgggggatctc
gcggccgatctctcctccgccaccatcagcaagaagcagctcaagaaggatgcgaggaag
gcggagaaggccgagaaggcgtcgcagcgccagcagcagcagcagccgcaggccgacgcc
gacgaccccttcgcggccaactacggcgacgtccccgtcgaggagatccagtccaagacc
atctccggccgcgtgtggaccgagatcggcggcctcgacgaggccgccgccggccgctcc
gtcctcatccgcggcgccgcgcaggcgatccggcccgtcagcaagaagatggccttcgtt
gtgctgcgcgagagcatgagcaccgtccagtgcgtgctcgtcgccagcgccgacgcaggg
gtcagcacccagatggtgcgcttcgccacctccctcagcaaggaatcaatcgtcgacgtc
gagggcgtcgtctccctccccaaggagcccctcaaggccaccacgcagcaggtggagatt
caggtgaggaagatctattgcatcaatagggcgatccccacccttccaatcaaccttgag
gatgcctcacggagtgaggctgaaattgaaaaggctgaacaagctggagagaagctagtt
cgtgtgggccaagatactcgcttgaactatagagctattgatctccggacacctgcaaat
caagcaatattcagaattcaatgtcaagttgagaacaaattcagggaatattttctgtcg
aaaaattttgttgggattcacagcccaaagctaattgctggatccagcgaaggtggtgca
gctgtattcaagctacagtacaatggacagccagcatgtttagcacagtctcctcagttg
tataagcagatggctatttgtggtgggtttgaacgtgtatttgaggttggacctgttttt
agagctgagaattcaaacactcacaggcatctgtgtgagtttgttggccttgatgctgag
atggagattaaggaacattattttgaggtttgcgacataatagatggtttgtttgtagca
atatttaaacacttgaatgaaaattgcaagaaagaactagagacaataaacaggcaatat
ccatttgaacctctgaagtatttagagaaaactttgaagctcacgtatgaagaaggaatt
caaatgctgaaggaagctggaacagaaatcgaacccatgggtgacctcaacactgaagct
gagaaaaaactaggccggcttgttaaggagaagtatggaacagaatttttcatcctctat
cggtatcctttggctgtgcgtcccttctacaccatgccttgttatgacaacccagcttac
agtaactcttttgatgtctttattcgaggagaggaaataatatctggagcacaaagaata
catttaccagagctattgacgaaacgtgcaacagagtgtggaattgatgcgagtactatt
tcatcatatatcgaatcgttcagctatggtgcacctcctcatggtggttttggtgtcggc
ctggagagggtggtaatgctgttctgcgccctaaacaacatcaggaagacatcacttttc
cctcgcgatccacaaaggctggtgccataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (11)   
   RefSeq(nuc) (1)   
   GenBank (5)   
   EMBL (5)   
Protein domain (4)   
   Pfam (4)   
All databases (51)   

Download RDF
DBGET integrated database retrieval system