KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4331780
Entry
4331780           CDS       T01015                                 
Name
(RefSeq) nuclear pore complex protein NUP96
  KO
K14297  nuclear pore complex protein Nup98-Nup96
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    4331780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:osa03019]
    4331780
   03036 Chromosome and associated proteins [BR:osa03036]
    4331780
Messenger RNA biogenesis [BR:osa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     4331780
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    4331780
SSDB
Motif
Pfam: Nup96 Nucleoporin2
Other DBs
NCBI-GeneID: 4331780
NCBI-ProteinID: XP_015631620
UniProt: Q10R44 Q0DUQ8
Position
3:3859387..3864638
AA seq 1005 aa
MSSDPVFPVLRHGDYFTKPSIDELVEREAADPGYCSRVPDFVVGRVGYGRIHFPGDTDVR
GMDLNGIVKFGRHSVEVYKDEASKPPLGQGLNKPAEVTLMLNLSVLPEPSALGELLKCQT
RKQGARFVSFNHSSGRWKFEVDHFSRFGLVDEEEEDVVMDEVVVRQPIAEVRDPPANGHE
LELSRSLPAHLGLDPAKMHEMRMTMFSNEEGDEDMEDGFPSDQRYFSSEKMNVDSPNSSA
KGLRLRSLSPLHGSSLKVSRRPGVIGRREPQALLEYSVNSSEHGPSSHGILMSGQNKGFP
VRMTKVDGFKLPSDQETPVAGNVYSNCVVDAALFMGRSFRVGWGPNGILVHSGSLVNRPG
TGLSSVIHIEKVAGDKVVRDEKNKIKEELTDLCFSDPLDLHRRLHHEYLETESDLFKLKL
QKVVASRFVLPDICRSYIDIIERQLEVSDLSMSSRVLLMHQVTVWELIRVLFSERATGNQ
LEPTGDEDQEGMILDKKEGTVAIDLEALPLVRRADFSNWLQDSVCHRVQGEAGSLNDARY
LEHIILLLTGRQLDTATEVAAFRGDVRLAILLSQAGGSMLNRSDLSQQLDLWKTNGLDFD
YIQEDRLKIYELLSGNVQGALVDSSIDWKRYLGLIMWYQLSPDASLDIIIHSYHQLLGEG
KVPYPVPVYIDEGPLDESLQWSPGDRFDISFYLMLLHANQDEKFGMLKTMFSAFSSSYDP
LDYHMIWHQCSILEAIGAFSSNDLHVLDLSFVYQLLCLGKCHWAIYVILHMPHLDDAPYI
HEKLIREILSQYCESWSKDETQRVYIAELGIPVEWMHDALALYNEYYGDQQSALENYILC
GNWKKAHTIFMTSIAHSLFLSSKHQEIWDITSSLEVHKSEIADWELSAGIYIDFFILRNS
MQEKSTMDDPDQLEKKNESCSTFFGRLNDSLIVWGSKLPVEARACFSKMAEELCELLMNS
PGEGLTPDLYMGCFQTMLNAPVPDDHRSSYLQEAVSVFTDILCRD
NT seq 3018 nt   +upstreamnt  +downstreamnt
atgtcttccgacccggtgttccccgtgctccgccatggcgattacttcaccaagccgtcg
atcgatgagctggtggagagggaggcggctgaccctggctactgcagcagggtcccggat
ttcgtcgtcgggagggtcgggtatgggcgaattcacttccccggtgacactgatgtgagg
gggatggacctgaatgggatcgttaagttcggtaggcactctgtggaggtttacaaggat
gaggctagcaagccgcctttagggcaaggtcttaataagccagcagaagtgacgttgatg
ctgaatttgagcgtgcttccagagcctagcgctcttggggagttgcttaagtgtcaaacg
agaaagcaaggcgctaggttcgtttcgttcaaccactcgagcggcaggtggaagttcgag
gttgatcattttagtcgattcggtcttgtggacgaggaggaagaggatgttgtgatggat
gaggtggttgttcggcagcctattgcggaagtaagagacccacctgcaaatggtcatgag
ctggagctttcacgttcgttgcctgctcatcttgggcttgaccctgcaaagatgcatgaa
atgcggatgacgatgttctccaatgaggaaggtgatgaagatatggaggatggattccca
tctgatcagagatacttcagcagtgagaagatgaatgtggattcaccgaactcaagtgct
aaaggtttgaggctaaggtctctctctcctttgcatggttcttctctgaaagtcagcagg
agacctggtgtaattggtaggagagaaccacaggctctgctggaatacagtgtaaattct
tcagaacatggcccatcttctcatggtattcttatgtctgggcaaaacaagggatttcca
gtgagaatgaccaaggtggatggctttaagttgccatctgatcaggaaactcctgtggct
gggaacgtatattccaattgtgttgtggatgctgctttatttatgggcaggtcatttcgt
gttggttggggaccaaatggcatccttgtacattctggcagtcttgtcaatagacccgga
actggtctatcttctgttattcacatagagaaagttgcaggcgacaaagttgtacgtgat
gagaagaacaaaattaaggaggagctgactgatctgtgcttctcagacccgctggatctc
cataggaggcttcatcatgaatatctggagactgagtctgacttgtttaaattgaagctt
cagaaggttgtggcaagtcgctttgtgttgccagatatttgcagatcttatattgacatc
attgaaaggcagcttgaagtcagtgatttatctatgtcttctcgtgtgctgttaatgcac
caggttacagtttgggagcttattcgggtcttgttctcagaaagagcaactggtaaccag
ttagagcctactggtgatgaggaccaggaggggatgattttagataagaaagaaggtact
gttgccatagaccttgaagcactccctttggttagaagagcagactttagcaattggtta
caggacagtgtttgtcatcgggttcaaggagaggcgggctccttaaatgatgccaggtat
ctggaacatattattctgcttttgactggtcggcaattagacacagccacagaagttgct
gcctttaggggtgatgttcgactggcaattttgctaagccaggcaggtgggtcaatgcta
aatcgttctgacctttctcagcaactggatctatggaaaacaaatggtctggattttgat
tatattcaggaagacaggttaaagatatatgagttgctttctggtaatgtacaaggcgcg
ttggtagattcatcaattgactggaaacggtaccttggtttaataatgtggtatcaacta
tcacctgatgcatcacttgatattatcattcactcttatcaccagctccttggtgagggc
aaagtcccatatcctgtacctgtatatatagatgaaggaccccttgatgagtcacttcaa
tggtccccaggtgaccgctttgacatatccttttatctaatgctgcttcatgcaaatcaa
gacgagaagtttgggatgctaaaaactatgttcagtgcattctcatcttcatatgatccc
ttggactaccatatgatctggcatcagtgttccattctggaagctatcggtgctttcagt
tcaaatgatcttcatgtgctagatttgagttttgtttaccaattattgtgtctggggaag
tgccattgggctatctatgtcattctacatatgcctcatcttgatgacgccccatacatc
catgagaagttgatcagggaaattttgtcacaatattgcgaatcatggagcaaggatgaa
actcagagagtttatattgcagaacttggtattccagtagaatggatgcatgacgctctg
gctctttacaatgaatactatggagatcagcaaagcgcactggagaattatattctgtgt
ggcaactggaagaaagcccatacaattttcatgacatccattgctcattctttgtttctg
tcatctaagcatcaagagatctgggacattacaagctctttggaggttcacaagtctgaa
attgctgactgggaacttagtgctggaatatacatagacttcttcattctaagaaattct
atgcaagaaaaaagtaccatggatgatccagatcaacttgagaagaaaaatgaatcatgc
agcactttctttggccggttaaatgattcattgatagtctggggaagtaaattacctgtt
gaggcaagggcatgcttctcgaagatggcagaggagctgtgcgagctactaatgaactcc
cccggcgagggcttgacgccagatctctacatgggctgctttcagacgatgcttaacgct
cctgtgcccgacgaccacaggtcatcctacctgcaagaggcggtctctgttttcaccgac
atactttgcagggactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (48)   

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