KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4332383
Entry
4332383           CDS       T01015                                 
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
  KO
K13171  serine/arginine repetitive matrix protein 1
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03013  Nucleocytoplasmic transport
osa03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    4332383
   03015 mRNA surveillance pathway
    4332383
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:osa03019]
    4332383
   03041 Spliceosome [BR:osa03041]
    4332383
Messenger RNA biogenesis [BR:osa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     4332383
Spliceosome [BR:osa03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   SR-related proteins
    4332383
SSDB
Motif
Pfam: PWI
Other DBs
NCBI-GeneID: 4332383
NCBI-ProteinID: XP_015631610
UniProt: Q10NF9
Position
3:complement(9028761..9035346)
AA seq 840 aa
MSGGFFRGTSADQDTRFSNKQAKLLKTQKFAPELEHLVDMTKVKMDVMKPWIATRVTELL
GFEDEVLINFIYGLLEEKEADGKKIQIQLTGFMEKNTVKFMKELWSLLLSAQQNASGVPQ
QFLDAKEAEIQQKKAEESRIAQEIQKKREKDGREQELEKQKLMDGDAGNSRLGPDRADAE
EEKELDSKHSSRTKSRESLRSRSISLSPRGRRRSVSPRRRSPSPSRNSISFGRQQRSSRR
SVSPRRSFSPRKRSPRSTPSMSRRRSPYSRRSPSVPRHRSPSPHRRSHIRRKSPPFVRQR
SPSPHHRRSPGRAPRSPSPARHRSPRRRSSLDRHWSPSPGRRRPRSPSPGRRRPRSPSPG
RRRPRSPSPGRRRPRSPSPGRRRPRSPSPGRRRPRSRSPGRRRSPSPRGSPRLRSPKRPR
RSPISPRSRSANRRPSPQRRRSTSPHDRSPIHSRRSLSRDIEKGTNGIPSSNDVDVLQRN
KERSHDDNRNDTEVSGHLSSDSEHRKLTKSLNSPNKPERNSTRDSSLKGTDKHLPSQVRT
DSSGEEEGSRARENARKANSSRRKIKDFSADLELKKAHDDLSPGEKSPSQHSGKETRRKQ
NNQLSESSEDERDGRRTKHTVDSPDDSQQKQHTPSRVGMHNSYSKDGMNSEDAIKGLRDG
MASKKYPAKIDDDSESEDGSPFRKDKRKAHGNNNIDSGSSGSEESGKHRSHSEKRKHKKS
RKHKRRYDDSSDESNSESDDKESKRRRKEEKRLRKEERRRRREERHRRKADRQASKLKLK
HAETVDMASDLEKDRESDSDADARKKGSYNGRDESDQQKLEIELREKALESLRAKKAINH
NT seq 2523 nt   +upstreamnt  +downstreamnt
atgtcgggcggcttcttccgggggacgtcggccgatcaggacacccgtttctccaacaag
caggcgaagctgctcaagacgcagaagttcgcgcccgagcttgaacacctggtggacatg
actaaggtgaagatggatgtgatgaaaccatggatcgcgacccgtgtcaccgagctccta
gggttcgaggacgaagtgctcatcaacttcatctacggcctcctcgaagagaaggaggcg
gatggaaagaagatacagatacagctgacaggattcatggagaagaacacagtgaagttc
atgaaggagctgtggagcctcctactcagtgcacaacagaatgctagtggggtgccccaa
cagtttttagatgcaaaggaagctgagattcagcagaaaaaggcagaggaaagtagaatt
gctcaggagatccagaagaaacgggagaaagatggaagggagcaagaactagagaaacaa
aaattgatggacggggatgccggtaattctagattaggtcctgatcgtgctgatgctgag
gaggaaaaagaactggattctaagcatagctcaagaacaaagagccgggaaagccttagg
tccaggagcatctccttgtcgcctcgcggtaggcggcgatctgtttctcctaggaggcgt
tctccatctccttccagaaattccatttcttttgggagacagcaacgatcttcaaggcgc
tcagtttcacctaggcgttctttttctccacgaaagcgttctccaagaagtaccccttcg
atgtcgaggcggagatcaccgtattccagaagatcaccttcagtaccaagacatcgatct
ccgtcacctcatcgtagatctcatattcgcaggaaatctccaccttttgtgcgtcagaga
tcaccatctccacaccatcgccggtctccaggtcgtgcaccaagatcaccatctcctgca
cgtcatagatctcctcggcgcaggtcatctctagacaggcattggtctccatctccagga
agacgtaggcctcggtccccttcacccggacgacgtaggccacggtccccttcacccgga
cgacgtaggccacggtccccttcaccaggaagacgtaggccacggtccccttcaccagga
agacgtaggccacggtctccatctccgggtagacgcaggccaaggtcacgatctccagga
agacgaagatccccctctcctcgaggctctccgcggttgaggtcaccaaaacgccctagg
agatcgccaatttcacccagaagtcgttctgcaaaccgtcggccctctccacaacgaagg
aggagtaccagtccacacgataggagcccaatccattctcgcaggagcttgagtagagac
attgaaaaaggaacaaacggcattccctccagtaacgatgtagatgtgcttcaaaggaac
aaagaaagatcacacgatgacaataggaatgatacagaagtgagtggccatctttcatcg
gattctgagcatcgtaagctgacaaaatccttgaattctccaaacaagccagaaaggaac
tcgacacgcgatagttctttgaagggcactgataagcacttgcccagtcaggtcagaaca
gatagcagtggagaagaggagggcagtcgtgcaagagagaatgcacgaaaagcaaattca
tcacgcagaaaaattaaggatttctcagcagatctggaactaaagaaagcacatgatgat
ttgagccctggagaaaaatctccatcacaacatagtggcaaggagacaaggaggaaacag
aacaatcaactgtcagagtcatcagaagatgagcgtgatggtagaagaacgaaacacacg
gttgattctcctgatgattcccaacagaaacagcacactcctagtagagttggaatgcac
aactcttattcaaaggatggcatgaacagtgaggatgcaataaagggtttacgtgacggt
atggcttctaagaagtatcctgctaaaatcgatgatgattctgagtcagaagatggaagt
ccttttcgaaaagataagagaaaagcacacggtaataacaacattgattctggcagttca
ggttcagaagaatcagggaaacatagatcccattctgagaagcgaaagcataaaaagagc
cgtaagcataagagacgttatgatgacagttctgatgaatctaattcggagtcagatgac
aaagagtccaagaggaggagaaaggaagagaagaggttgcgaaaagaggaaagacggcgc
agacgtgaagagcggcaccgtagaaaggcagaccgtcaggccagcaaactaaaactgaag
catgctgaaactgttgatatggcttcagatcttgagaaggatcgtgaatctgactcagat
gctgatgctaggaagaaaggttcatataatggaagagacgaatcggatcagcagaaactt
gaaattgagcttcgcgagaaggctctggaatctcttagagcaaagaaagccatcaaccac
tag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (943)   
   KEGG ORTHOLOGY (1)   
   RefGene (938)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (10)   
   RefSeq(nuc) (4)   
   GenBank (3)   
   EMBL (3)   
Protein domain (1)   
   Pfam (1)   
All databases (964)   

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