KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4339343
Entry
4339343           CDS       T01015                                 
Name
(RefSeq) chaperone protein ClpB1
  KO
K03695  ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:osa03110]
    4339343
Chaperones and folding catalysts [BR:osa03110]
 Heat shock proteins
  HSP100
   4339343
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small Clp_N AAA_5 AAA_22 AAA_16 Sigma54_activat AAA_18 bpMoxR AAA_14 nSTAND3 AAA_7 IstB_IS21 RuvB_N ATPase_2 AAA_28 TniB NACHT TsaE RNA_helicase Zeta_toxin DUF815 AAA_19 Mg_chelatase ResIII DNA_pol3_delta2 AAA_25 ABC_tran T2SSE DUF87 DUF2987 DASH_Spc19
Other DBs
NCBI-GeneID: 4339343
NCBI-ProteinID: XP_015640227
UniProt: Q6F2Y7
Position
5:complement(25803603..25807165)
AA seq 912 aa
MNPDNFTHKTNEALVAAHEIASEAGHAQLTPLHLVAALAADKGGILRQAISQASGGDAGA
PDSFERVVSGALKKLPSQSPPPDSVPASTALIKVIRRAQSAQKKRGDSHLAVDQLLLGLL
EDSLISDCLKEAGVSAARVRAELEKLRGGEGRKVESASGDTNFQALKTYGRDLVEQAGKL
DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLLDVRL
IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN
LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVFVAEPSVPDTISILRGLKEKY
EGHHGVRIQDRALVVAAQLSARYIMGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER
KRIQLEVEHHALEKEKDKASKARLVEVKKELDDLRDKLQPLTMKYRKEKERIDEIRKLKQ
RREELQFTLQEAERRMDLARVADLKYGALQEIDVAIAKLESETGENLMLTETVGPEQIAE
VVSRWTGIPVTRLGQNDKERLVGLADRLHQRVVGQAEAVSAVAEAVLRSRAGLGRPQQPT
GSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHEE
GGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTS
NLGAEHLLAGMVGKNSMKVARDLVMQEVRRHFRPELLNRLDEIVIFDPLSHEQLRKVARL
QMKDVAVRLAERGVALAVTDAALDVILSLSYDPVYGARPIRRWIEKRVVTQLSKMLIQEE
IDENCTVYIDAAPHKDELAYRVDNRGGLVNAETGQKSDILIQVPNGAATGSDAAQAVKKM
RIMEDEDGMDEE
NT seq 2739 nt   +upstreamnt  +downstreamnt
atgaatccggacaacttcacgcacaagaccaacgaggcgctcgtggcggcgcacgagata
gcgtcggaggcggggcacgcgcagctgacgccgctgcacctggtggcggcgctggcggcg
gacaagggcgggatactccggcaggcgatctcgcaggcgtccggcggggacgccggcgcg
ccggactcgttcgagcgcgtggtgagcggggcgctcaagaagctgccctcgcagtcgccg
ccgccggacagcgtgccggcgtccacggcgctgatcaaggtcatccgccgcgcgcagtcc
gcgcagaagaagcgcggggactcccacctcgccgtcgaccagctgctgctgggcctcctg
gaggactcgctaatctccgactgcctcaaggaggccggcgtgtccgcggcgcgggtgcgc
gccgagctcgagaagctccgtggcggggagggccgcaaggtggagtccgcgtccggcgac
accaacttccaggcgctcaagacctacggccgcgacctcgtcgagcaggccggtaagctc
gaccccgtcattggccgcgacgaggagatccgccgcgtcgtgcgcatcctgtcgcgccgc
acgaagaacaaccccgtactcatcggcgagcccggcgtcggcaagacggccgtcgtggag
ggcctcgcgcagcgcatcgtgcgcggggacgtgcccagcaacctgctcgacgtccgcctc
atcgcgctcgacatgggcgcgctcgtcgccggcgccaagtaccgcggcgagttcgaagaa
cggctcaaggccgtgctcaaggaggtggaggaggccgagggcaaggtgatcctcttcatc
gacgagatacacctcgtcctcggcgccgggaggacggagggctccatggacgcggccaac
ctgttcaagccaatgctcgcgaggggccagctccggtgcatcggcgccacgacgctggag
gagtaccgcaagtacgtcgagaaggacgccgcgttcgagaggcggttccagcaggtgttc
gtcgcggagccgagcgtcccggacaccatcagcatcctgcgaggcctcaaggagaagtac
gaggggcaccacggtgtgaggatccaggaccgcgcgctcgtcgtcgccgcgcagctctcg
gcgaggtacatcatgggacgccacctgcctgacaaagcgatcgacctcgtcgacgaggcc
tgcgcgaacgtgagggtgcagctggacagccagccagaggagatcgacaacctcgagagg
aagaggattcagctggaggtggagcaccacgcgctggagaaggagaaggacaaggcaagc
aaggcccggcttgtcgaggtcaagaaagagctggacgatctgagggacaagctgcagcca
ttgacgatgaagtacaggaaggagaaggagaggatcgacgagatcaggaagctgaagcag
cgccgcgaggagctccagttcacgctgcaggaggccgagcgccggatggacctcgcccgc
gtcgccgacctcaagtacggcgcgctccaggagatcgacgtcgccatcgcgaagctcgag
agcgagacgggggagaacctgatgctcaccgagaccgtcggccccgagcagatcgccgag
gtggtgagccgctggaccggcatcccggtgacccggctcggccagaacgacaaggagagg
ctcgtcggcctcgccgacaggctgcaccagagggtggtcggccaggcggaggccgtgagc
gccgtcgccgaggcggtgctgaggtcgcgcgccggacttggccggccgcagcagcccacc
ggctcgttcctcttcctcggtcccaccggcgtcggcaagaccgagctcgccaaggccctc
gccgagcagctgttcgacgacgagaacctgctcgtccgcatcgacatgtccgagtacatg
gagcagcactccgtcgctcgcctcatcggagcaccacctggctacgtcggccatgaggaa
ggtgggcagctgacggagcaagtgcggcggcggccgtacagcgtgatcctgttcgacgag
gtcgagaaggcgcacgtcgcggtgttcaacactctgctccaggttctcgacgacgggagg
ctcaccgacgggcaaggccgcacggtggacttcaggaacaccgtgatcatcatgacctcc
aacctcggcgccgagcacctcctcgccggcatggtcggcaagaactccatgaaggtcgcc
cgtgaccttgtcatgcaggaggtgaggaggcacttccgtcctgagctcctgaaccggctc
gacgagattgtgatattcgatcccctgtcccacgagcaactcaggaaggtcgcccgtctc
cagatgaaggacgtcgccgtccggctcgccgagaggggtgtcgccctggccgtcaccgac
gccgcgctggacgtcattctgtctctgtcctatgatccggtttatggcgcgaggccgatc
aggaggtggatcgagaagagggtggtgacgcagctgtccaagatgctgatccaggaggag
atcgacgagaactgcacggtgtacatcgacgcggcgccgcacaaggacgagctggcctac
agggtggacaaccgcggggggttggtgaacgccgagacggggcagaagtcggacatcctc
atccaggtgcccaacggcgccgccaccgggagcgacgccgcgcaggcggtgaagaagatg
aggatcatggaggacgaggacggcatggacgaagagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (20)   
   RefSeq(nuc) (4)   
   GenBank (8)   
   EMBL (8)   
Protein domain (34)   
   Pfam (34)   
All databases (88)   

Download RDF
DBGET integrated database retrieval system