KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4342614
Entry
4342614           CDS       T01015                                 
Name
(RefSeq) probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic
  KO
K01662  1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00730  Thiamine metabolism
osa00900  Terpenoid backbone biosynthesis
osa01100  Metabolic pathways
osa01110  Biosynthesis of secondary metabolites
Module
osa_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    4342614
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    4342614
Enzymes [BR:osa01000]
 2. Transferases
  2.2  Transferring aldehyde or ketonic groups
   2.2.1  Transketolases and transaldolases
    2.2.1.7  1-deoxy-D-xylulose-5-phosphate synthase
     4342614
SSDB
Motif
Pfam: DXP_synthase_N Transket_pyr Transketolase_C E1_dh TPP_enzyme_C Transketolase_N PFOR_II
Other DBs
NCBI-GeneID: 4342614
NCBI-ProteinID: XP_015647944
UniProt: Q6YU51
Position
7:4821213..4824667
AA seq 713 aa
MALQASSSPSMFRAIPTNTNASCRRKLQVRASAAAAAANGGGDGKVMMRKEAASGAWKID
YSGEKPATPLLDTVNYPVHMKNLSTPELEQLAAELRAEIVHTVSKTGGHLSSSLGVVELA
VALHHVFDTPEDKIIWDVGHQAYPHKILTGRRSRMHTIRQTSGLAGFPKRDESAHDAFGA
GHSSTSISAALGMAVARDLLGKKNHVISVIGDGAMTAGQAYEAMNNSGYLDSNMIVVLND
NKQVSLPTATLDGPATPVGALSKALTKLQSSTKLRRLREAAKTVTKQIGGQAHEVAAKVD
EYARGMVSASGSTLFEELGLYYIGPVDGHSVDDLVAIFNKVKSMPAPGPVLVHIVTEKGK
GYPPAEAAADRMHGVVKFDPTTGRQFKSKCSTLSYTQYFAEALIREAEADDKVVGIHAAM
GGGTGLNYFHKRFPERCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVHD
VDLQRLPVRFAMDRAGLVGADGPTHCGAFDVAYMACLPNMVVMAPADEAELMHMVATAAA
IDDRPSCFRFPRGNGIGAVLPPNHKGTPLEVGKGRVLVGGNRVALLGYGTMVQACMKAAE
ALKEHGIYVTVADARFCKPLDTGLIRELAAEHEVLVTVEEGSIGGFGSHVAHYLSLSGLL
DGPLKLRSMFLPDRYIDHGAPVDQLEEAGLTPRHIAATVLSLLGRPLEALQLS
NT seq 2142 nt   +upstreamnt  +downstreamnt
atggcgctccaggcatcgtcgtcgccgtccatgttccgcgcgatcccgacgaacaccaac
gcttcttgccggcgaaagttgcaggtcagggcgagcgcggcggcggcggcggcgaacggc
ggcggggatgggaaggtgatgatgaggaaggaggcggcgtcgggcgcgtggaagatcgac
tactccggcgagaagccggcgacgcctctgcttgacacggtgaactacccggtccacatg
aagaacctctcgacgccggagctggagcagctggcggcggagctccgggcggagatcgtg
cacacggtgtccaagaccgggggccacctgagctccagcctgggcgtcgtcgagctcgcc
gtggcgctgcaccacgtgttcgacacgccggaggacaagatcatctgggacgtcgggcac
caggcgtacccgcacaagatcctgacggggcggcgttcgcggatgcacaccatccggcag
acctccgggctcgccgggttcccgaagcgcgacgagagcgcgcacgacgcgttcggcgcg
ggccacagctcgacgagcatctcggcggcgctcgggatggcggtggcgagggacctcctc
gggaagaagaaccacgtcatctcggtgatcggcgacggcgccatgaccgccggccaggcg
tacgaggcgatgaacaactcgggctacctcgactccaacatgatcgtggtgctcaacgac
aacaagcaggtgtccctcccgacggcgacgctcgacggccccgccacgcccgtcggcgcg
ctgagcaaggcgctgacgaagctccagtcgagcaccaagctccgccgcctccgcgaggcg
gcgaagacggtgacgaagcagatcggcgggcaggcgcacgaggtggcggcgaaggtggac
gagtacgcgcgcggcatggtgagcgcgtcgggctcgacgctgttcgaggagctcgggctc
tactacatcggccccgtcgacggccacagcgtcgacgacctcgtcgccatcttcaacaag
gtgaagtcgatgccggcgccggggccggtgctcgtccacatcgtgacggagaaggggaag
ggctacccgccggcggaggccgccgccgaccggatgcacggcgtggtcaagttcgacccg
acgacggggaggcagttcaagtccaagtgttcgacgttgtcctacacccagtacttcgcc
gaggcgctgatccgggaggccgaggccgacgacaaggtggtcggcatccacgccgccatg
ggcggcggcacggggctcaactacttccacaagaggttcccggagcggtgcttcgacgtg
gggatcgcggagcagcacgccgtgacgttcgccgcggggctcgccgccgaggggctcaag
ccgttctgcgccatctactcgtcgttcctgcagcgagggtacgaccaggtggtgcacgac
gtcgacctgcagcggctgccggtgaggttcgccatggacagggcggggctcgtcggcgcc
gacgggcccacgcactgcggcgcgttcgacgtcgcctacatggcgtgcctgccgaacatg
gtcgtcatggcgcccgccgacgaggccgagctcatgcacatggtcgccaccgccgcagcc
atcgacgaccgccctagctgcttccgcttcccccgcggcaatggcattggcgccgtcctc
cctcccaaccacaagggcacacctctcgaggtcgggaaggggagggtgctcgtaggaggg
aacagggtggcgctgctagggtacggcacgatggtgcaggcatgcatgaaggcggcagag
gcgctgaaggagcacggcatctacgtcaccgtcgccgacgcgcgtttctgcaagccgctc
gacacagggcttatccgggagctcgctgccgagcacgaggtcctcgtcactgtggaggag
ggctccatcggagggttcggttctcacgtcgcccactacctcagcctcagcggcctcctc
gatggccccctcaagttgaggtccatgttcttgccagacaggtacatagaccatggtgca
ccagtagaccagcttgaggaggcaggattgacaccaaggcacattgctgccactgtgctg
tccttgcttgggaggccattggaggcacttcagctcagctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (12)   
   RefSeq(nuc) (2)   
   GenBank (5)   
   EMBL (5)   
Protein domain (7)   
   Pfam (7)   
All databases (48)   

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