KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4343753
Entry
4343753           CDS       T01015                                 
Name
(RefSeq) protein SHORT-ROOT 1
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
SSDB
Motif
Pfam: GRAS GRP
Other DBs
NCBI-GeneID: 4343753
NCBI-ProteinID: XP_015645491
UniProt: Q8H2X8
Position
7:23868300..23871102
AA seq 602 aa
MDTLFRLVSLQAASEQQQQQQQSASYNSRSTTSSGSRSSSHQTNASYSYYHHSSNSGGGG
GGGGGYYYGGQQPPPSQYYYLEPYQEECGNAPHHQLYMDEDFSSSSSSRHFHHGARVQQQ
QPPASSTPTGTAPTPPLSTSSTAAGAGHGLFEAADLSFPPDLNLDFSSPASSSGGGTASS
GAVGGGGGGRWASQLLLECARSVAARDSQRVQQLMWMLNELASPYGDVEQKLASYFLQGL
FARLTASGPRTLRTLAAASDRNTSFDSTRRTALRFQELSPWSSFGHVAANGAILESFLEV
AAAASSETQRFHILDLSNTFCTQWPTLLEALATRSADETPHLSITTVVSAAPSAPTAAVQ
RVMREIGQRMEKFARLMGVPFRFRAVHHSGDLAELDLDALDLREGGATTALAVNCVNSLR
GVVPGRARRRDAFAASLRRLDPRVVTVVEEEADLVASDPDASSATEEGGDTEAAFLKVFG
EGLRFFSAYMDSLEESFPKTSNERLALERGAGRAIVDLVSCPASESMERRETAASWARRM
RSAGFSPVAFSEDVADDVRSLLRRYREGWSMREAGTDDSAAGAGVFLAWKEQPLVWASAW
RP
NT seq 1809 nt   +upstreamnt  +downstreamnt
atggatacgctgtttaggttggttagcctccaagccgcctccgagcagcagcagcagcag
cagcagtcggcgtcctacaactcgaggagcacgacgtcgagcgggtccaggtcgtcgtcg
caccagacgaacgcgtcctacagctactaccaccacagcagcaacagcggcggcggcggc
ggaggcggcggagggtactactacggcggccagcagccgccgccgtcgcagtactactac
ctggagccgtaccaagaagaatgcggcaacgccccacaccaccagctttacatggatgaa
gacttctcctcctcgtcgtcgtcgaggcacttccaccacggcgcgcgggtgcagcagcag
cagccgccggcgtcgtccacgcccacggggacggcgccgacgccgccgctgtcgacctcg
tccaccgcggcgggcgccgggcacggcctgttcgaggcggcggacctgtcgttcccgccg
gacctcaacctcgacttctcgtccccggcgtcgtcgtccggcggcgggacagcgtcgtcg
ggcgcggttgggggcggcggcggcgggaggtgggctagccagctgctgctggagtgcgcg
cggtcggtggccgcccgcgacagccagcgcgtgcagcagctcatgtggatgctcaacgag
ctcgcgtcgccgtacggcgacgtggagcagaagctggcttcctacttcttgcaggggctg
ttcgctcggctcacggcgtccgggccgcgcacgctgcgcacgctcgccgcggcgtccgac
cggaacacgtcgttcgactcgacgcggcgcacggcgctgcggttccaggagctcagcccc
tggtcctcgtttgggcacgtcgccgccaatggcgccatcctcgagtccttcctggaggtc
gccgccgcggcgtcgtcggagacgcagcggttccacatcctcgacctgagcaacacgttc
tgcacgcagtggccgacgctgctggaggcgctggccacgcggtccgccgacgagacgccg
cacctctcgatcaccaccgtggtgtccgccgcgccgtccgcgcccacggcggcggtgcag
cgcgtcatgcgggagatcgggcagcgcatggagaagttcgcgcggctcatgggcgtgccc
ttccgcttccgcgccgtgcaccactccggggacctcgcggagctcgacctcgacgcgctc
gacctccgcgagggcggcgccaccaccgcgctcgccgtcaactgcgtcaactcgctgcgc
ggcgtggttcccggcagggcccgccggcgcgacgcgttcgcggcgtcgctccgccggctg
gacccgcgggtcgtcaccgtcgtcgaggaggaggcggacctggtggcgtccgatcccgac
gcgtcgtcggcgacggaggaaggcggcgacacggaggcggcgttcctcaaggtgttcggc
gagggcttgcgcttcttctcggcgtacatggattcgctcgaggagagcttccccaagacg
agcaacgagaggctggcattggagaggggagcagggcgcgccatcgtcgacttggtctcg
tgcccggcgtcggagtcgatggagcggcgggagacggcggcgtcgtgggcgcggcgcatg
cggtcggccgggttctctccggtggcattcagcgaggacgtcgccgacgacgtgcgatcg
ctgctgcgccggtacagggaagggtggtcgatgcgcgaggccggcacggacgactcggcg
gccggagccggcgtcttcctcgcgtggaaggagcagcctctggtgtgggcaagcgcgtgg
cggccatga

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Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (12)   
   RefSeq(nuc) (2)   
   GenBank (5)   
   EMBL (5)   
Protein domain (2)   
   Pfam (2)   
All databases (36)   

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