KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4346606
Entry
4346606           CDS       T01015                                 
Name
(RefSeq) DNA topoisomerase 6 subunit B isoform X1
  KO
K03167  DNA topoisomerase VI subunit B [EC:5.6.2.2]
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:osa03032]
    4346606
Enzymes [BR:osa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     4346606
DNA replication proteins [BR:osa03032]
 Prokaryotic type
  DNA Topoisomerases
   4346606
SSDB
Motif
Pfam: Topo-VIb_trans HATPase_c HATPase_c_3
Other DBs
NCBI-GeneID: 4346606
NCBI-ProteinID: XP_015612693
UniProt: Q6H442
Position
9:5874952..5883039
AA seq 696 aa
MDDDAGDGAASGGTKRKVTAASSSAAAKGKAAGKGKAASKASALATAKESSLLKQKSPAE
FFAENKNIAGFDNPGKSLYTTMRELVENALDSAESISELPDIEIIIEEITKSKFNTMIGL
VDRQRIDEELYDDFESAKAREKRLAKEARFQETQAKNAALGKKVKEAPAARGKGRGEAAF
FRVTCKDNGRGMPHDDIPNMLGRVLSGTKYGLRQTRGKFGLGAKMALIWSKMSTGLPIEI
KSSMKGQNFISFCLLDIDIHKNVPHVHLHEKRENKDRWHGAELQVIIEGNWTTHRSKILH
YMRQMAVITPYAQFLFRFLSDSPDKNLTIQFARRTDVMPPIPLQTKHHPSAVDLLLIKRL
ISETTKQNLLQFLQHEFVNISKSHAERLIGEMGPDFSAKTTVKSLTSQQLVRIHQLFRQA
KFDDPSGNCLSPAGEYNLRLGIIKELHPDLVATHASSPQVFEGHPFIVEAGISIGGKDVK
HGLNIFRYANRIPLLFEQGADVITRTALKRINWSSYKINQQQDKIGVFVSIVSTKIPFKG
TGKEYIGDDITEIASAVQSALKQCCLQLKSKIVKKLQARERQDRKRNLNRYIPDVARAIM
ETLGEIADESPPKRPRYDKEDEELLEKVNSEEVTEMTFRDCLTQHVEQVDYEMALEYAMQ
SGVSEEPREALYLNSLEGSYKFIDFQSPVFVFRFIP
NT seq 2091 nt   +upstreamnt  +downstreamnt
atggacgacgacgctggcgacggcgccgctagcggcgggacaaagaggaaggtcactgcg
gcgtcgtcgtcggcggcggcgaaggggaaggcggcggggaaagggaaggccgcctctaag
gcgtcggcgttggccacggccaaggagagcagcctcctcaagcagaagtcgcctgctgaa
ttcttcgcggagaacaagaacatcgcggggtttgacaatcctggaaagtcactgtacaca
acgatgcgggagttagttgagaatgcccttgattcagccgagtccatctctgagctccct
gacatagaaattataatagaagagatcacgaagagcaagttcaacacaatgatagggcta
gttgatcgacagcgtattgatgaagagctctatgatgactttgaatcggctaaggctcgt
gagaaacgccttgccaaagaagcacgcttccaagaaacacaagccaaaaatgctgctctt
gggaagaaggttaaggaggctccagctgctcgagggaaaggtcggggtgaggctgcattt
tttagggtgacttgcaaggataatggtcgaggtatgccacatgatgatatcccaaatatg
cttggtagagtgttatcgggcacaaagtatggtttgaggcaaacacgtggaaaatttggt
cttggtgctaaaatggcacttatatggtcaaagatgagcacaggccttcctattgagatt
aagtcatcaatgaaaggccagaattttatttcattttgtcttcttgatatcgatattcat
aagaatgtccctcatgttcatttacatgagaaaagggagaataaagatcgctggcatggg
gcggagcttcaagttataattgaggggaattggacaactcatcgttcaaagatactacat
tacatgcgtcagatggctgtcatcacaccatacgctcaattcctttttagatttctctca
gactcacccgacaaaaatttgacaatacagtttgcacggaggacagatgttatgcctcct
attcctcttcaaactaagcatcatccttctgctgttgatttactgctgataaagcgctta
atatcagagactacaaagcaaaaccttttgcagttcctccaacatgagtttgtgaatatt
agcaaatctcatgctgaacgtttgatcggggagatggggcctgatttcagtgcaaaaacg
acagttaagagtcttacatcacagcaattagttcggatacatcagttatttcggcaggca
aaatttgatgatcccagtggcaattgtcttagtcctgcaggtgaatacaatttacgtcta
ggtatcataaaagagctgcaccctgatctagttgctacgcatgcaagcagcccacaggtt
tttgaaggtcatccattcatcgttgaagctggaataagtattggtggaaaagatgttaaa
catggtctaaacatttttagatatgcgaaccgaatcccacttctctttgaacaaggtgct
gatgtcatcacaagaactgctttaaaaagaatcaattggagcagctacaaaataaatcaa
cagcaggacaagattggtgtctttgttagcattgtaagtacaaagataccttttaaagga
actggaaaagagtacattggggatgacataaccgaaatagcatctgctgttcagtcagcc
cttaagcagtgttgtcttcaactgaagtcaaagatagtaaagaaactacaggctcgtgaa
cggcaggacaggaaaaggaacctaaacagatacattcctgatgttgcgagggcaattatg
gagactctgggagaaattgcagatgagtctcccccaaagaggccacgttatgataaggaa
gatgaggaactccttgagaaagtaaactctgaggaggtgacagagatgacctttagggat
tgcttaacacaacatgttgaacaggttgattatgaaatggcattggagtacgccatgcag
agtggagtaagcgaggaacctcgtgaagcattatatttaaactcccttgaaggatcttac
aagtttatcgatttccagagccctgtttttgtgttcagatttattccttga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (13)   
   RefSeq(nuc) (3)   
   GenBank (5)   
   EMBL (5)   
Protein domain (3)   
   Pfam (3)   
All databases (46)   

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