KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4347368
Entry
4347368           CDS       T01015                                 
Name
(RefSeq) ribosomal RNA small subunit methyltransferase B
  KO
K03500  16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:osa03009]
    4347368
Enzymes [BR:osa01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     4347368
Ribosome biogenesis [BR:osa03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    4347368
SSDB
Motif
Pfam: Methyltr_RsmB-F NusB FtsJ Methyltransf_31 Met_10 Methyltransf_15 Methyltransf_25 Ubie_methyltran
Other DBs
NCBI-GeneID: 4347368
NCBI-ProteinID: XP_015611691
UniProt: B9G461 Q0J0Y4
Position
9:18293004..18311989
AA seq 570 aa
MEGGALALPHFRSRVGIGSPILLSADPGAARRSSGASGRSRVSRVNPGAYPRSAGRGRTW
KRDSPEAPPRRSGITRVPNRSPEMPTERAGRTKVSNVNLEVSHHRAVAAVRLLRIEKGKA
FVDLLNEKGNSSGENEMSYVERTLGFSIRCLDNRDIRLVTVIVAGTVRWKRYLDYLIMSL
CSEEKVFREMEPLLLQILRIGFFEILKLNVPAYAAVDENVRLAKVALRPGAGNLVNAILR
KLLLLKEANSLPLPKIEGDDRAQARALSIIYSHPVWMVRRWIRFLGKEEALKLMKWNNSD
PHFSIRVNTANGYTRADLIDRLESLQVHYEKSTMDEFVRIQEGMQTVLQAGLLKEGMCAV
QDESAGLVVSVVDPQPGETIIDCCAAPGGKTLFMAARLSGQGKIWALDINKGRLRILMEA
AKLHNLDAMISDIHADLRLYAKETTATFDKVLLDAPCSGLGVLSKRADLRWNRQFEDLEE
LMCLQDELLDSASMLVKPGGILVYSTCSIDPEENEHRIAAFVQRHPDFVLQSVHGYVPAE
FVTDEGFYSSSPTKHSIDGAFAARLVRSVL
NT seq 1713 nt   +upstreamnt  +downstreamnt
atggagggaggagccctcgcactcccgcacttccgctcgcgcgtcggcatcggctcgccc
atcctgctctccgccgaccccggcgccgcccgcaggagctccggcgcctccgggaggagt
agggtttcgagggttaatccaggagcgtatccgagaagtgcagggagaggtaggacttgg
aagcgtgacagcccggaggctccacctcgccgatcaggaattactagagttccaaatcgt
agtcctgagatgcctactgaaagagcagggaggactaaggtttcaaatgtaaatttggag
gtatctcatcacagagcagttgcagcagtgaggttgctaaggattgagaaggggaaggca
tttgtggaccttttgaatgagaaaggaaacagttccggagagaatgagatgagctatgtc
gaaaggacactagggttcagcatacggtgtttggataacagggatataagattggttact
gtcatagtcgctggaactgtgcgttggaaacggtaccttgattatctgatcatgtcactc
tgtagtgaggagaaggtgttcagggagatggaaccactacttctgcagatattacgaatt
ggtttctttgaaattctcaagctcaatgtgccagcttatgctgctgttgatgagaatgta
aggcttgctaaagtagctctaaggcctggtgctgggaacctggtgaatgcaattctgcgt
aaacttctactgctaaaggaggcaaactctcttcctcttccaaagatagaaggtgatgat
cgtgcccaagctcgcgcactttccattatttattctcatcctgtctggatggtgagaaga
tggattcgttttctgggcaaagaagaagctctaaaattaatgaaatggaataacagtgat
cctcatttcagtataagggtcaacacagcaaatgggtatacaagggctgatcttatagat
cgattggaaagtttgcaggttcattatgagaagtcaactatggatgaatttgtccgtatt
caggagggtatgcagactgtcctgcaagctggactactgaaagaaggcatgtgtgctgtg
caggatgagagtgcaggtcttgtggtgtctgtggtcgatccacaacctggggaaacaatc
attgattgttgtgctgcacctggtggcaaaactttgttcatggcagcccgtttatcggga
caagggaagatatgggcacttgacataaacaaaggtcggttgagaattctcatggaggca
gcaaagttacacaatcttgatgctatgatcagtgacatccatgctgatcttcgactatat
gctaaggaaaccactgcaacatttgacaaggtactgttggatgctccatgctctgggtta
ggagttctttccaagagggcagacttgcggtggaatagacaattcgaagatttggaggag
ctaatgtgtttgcaagatgagcttcttgattctgcatcaatgttagtaaagcctggtggt
atattagtctacagtacatgttccattgaccctgaagaaaacgagcacagaattgctgct
tttgttcagaggcatccggactttgtcctacagagcgtgcatggatatgttcctgctgaa
tttgtcacagatgagggtttctattcctcaagtccaactaagcactctattgatggggca
tttgctgctcgtcttgttcggtccgtcctctag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (10)   
   RefSeq(nuc) (8)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (49)   

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