KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4347497
Entry
4347497           CDS       T01015                                 
Name
(RefSeq) leucine--tRNA ligase, cytoplasmic
  KO
K01869  leucyl-tRNA synthetase [EC:6.1.1.4]
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    4347497
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:osa01007]
    4347497
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:osa03016]
    4347497
   03029 Mitochondrial biogenesis [BR:osa03029]
    4347497
Enzymes [BR:osa01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.4  leucine---tRNA ligase
     4347497
Amino acid related enzymes [BR:osa01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   4347497
Transfer RNA biogenesis [BR:osa03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    4347497
 Prokaryotic type
    4347497
Mitochondrial biogenesis [BR:osa03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    4347497
SSDB
Motif
Pfam: tRNA-synt_1 tRNA-synt_1g Anticodon_1 tRNA-synt_1e tRNA-synt_1f
Other DBs
NCBI-GeneID: 4347497
NCBI-ProteinID: XP_015611831
UniProt: A0A0P0XP69 Q0J0N6
Position
9:19472456..19477140
AA seq 1095 aa
MSSNPDGGRSFARRDILLKIQSDAQKWWEESKVFEAEPGNKPPGPGEKFFGNFPYPYMNG
LLHLGHAFSLSKLEFGAAYQRLRGSNVLLPFAFHCTGMPIKASADKLSREAQQYGYPPAF
PEVEDDSSAEVADSSQADNAASVVPDKFKSKKSKAASKVGMQKFQWEIMRGFGLSDEEIA
KFQDPYHWLTYFPPLAKEDLKAFGLGCDWRRSFITTDMNPFYDAFVRWQMRKLKKMGKVV
KDMRYTIYSPLDGQPCADHDRASGEGVQPQEYVLIKMEVVPPFPPKLKTMEGRNVYLAAA
TLRPETMYGQTNCWVLPDGKYGAFEINDTDVFIVTSRAALNLAYQNLSRVPEKPTCLMEL
SGCDLIGLPLKSPLAFNEIIYALPMLTILTDKGTGIVTSVPSDSPDDFMALQDLVAKPAL
RQKYGVKDEWVLPFKVVPIINIPEFGDKSAEKVCLDLKIKSQNDKEKLAEAKRMTYLKGF
TDGTMIVGEFNGRKVQEAKPLIKNKLLEEGTAVLYSEPEKKVMSRSGDECVVALTDQWYI
TYGETEWKQKAVQCLEKMNTFSAETRNGFEHTLGWLNQWACSRSFGLGTRIPWDEQFLVE
SLSDSTLYMAYYTIAHLLQNGNMYGKEISSIRPEQMTDEVWDYVFCDGPAPNSDIPPALL
SKMKLEFEYWYPFDIRVSGKDLIQNHLTFSIYNHTALLPEHHWPRGFRCNGHLMLNSEKM
SKSTGNFRTLRQAIEEFSSDATRFALADAGDGMDDANFVFETANAAILRLTKEIAWMEEV
IAAESSLRAGPPSTYADHVFANEINIAVIETEKSYNAFMFRDALKLGFYDLQLARDEYRL
SCGAAGMNRELLWRFMEVQTRLITPICPHYAEHVWRNILRKEGFAIKAGWPIAGTPDPTL
RIANKYLQDSIVKFRKLLQKQESGSKKPKKGTAPPPSEQNKLTVGLVYVNENYYGWKEQC
LRVLQSKFDSQARLFAPDEEINEALKNCSIGQETNFKQVQKLCMPFIKSKKDEARSVGPH
ALNLKLPFGEMSVLEENLELIKRQVGLEHAEVLSASDEAARAKAGVHASMLDKTPPSPGE
PVAIFMSKLDLEARC
NT seq 3288 nt   +upstreamnt  +downstreamnt
atgtcatcaaatcctgatggaggcagaagttttgctcggagagatattttactcaagatc
cagtcagatgctcaaaaatggtgggaggagagcaaggtttttgaggctgaacctgggaat
aaacctccgggccctggggaaaagttctttggcaactttccatatccttacatgaatggc
ttgctacatttgggccatgcgttctccttgtctaaacttgagtttggtgctgcatatcag
aggcttcgtggttcaaatgttcttttgccatttgctttccactgtacgggaatgcccatc
aaggcctcagcagataaactctctagggaggcgcaacaatatggatatcctccagcgttt
cctgaagtagaggatgattcaagtgcagaagttgctgatagtagccaggctgacaatgcg
gcttctgttgtcccagataaatttaagagcaagaaatctaaggctgcttcgaaggttggc
atgcagaagtttcagtgggagatcatgagaggctttggcttatcagatgaagaaatcgcc
aaatttcaggatccttaccactggttaacttacttccctccattggcgaaggaggacctc
aaggcctttggtctgggctgtgattggaggaggtcattcataactactgacatgaacccc
ttctatgatgcatttgtccggtggcaaatgagaaagctgaagaaaatgggcaaggttgtc
aaagatatgaggtacacaatctactctccattggatggtcaaccttgtgctgaccatgat
cgagcatctggtgaaggtgtacagccacaagaatatgtgttaattaaaatggaagttgtt
ccaccttttcctcccaagttgaagaccatggaaggaagaaatgtttatttggcagcagcc
acattgagacctgagacaatgtatgggcagacaaactgttgggtattgcctgatggaaaa
tatggggcctttgagatcaatgacactgatgtcttcattgttacatcaagggctgctctt
aatcttgcatatcagaatctatcaagggtcccagaaaaaccaacttgcttaatggagtta
tctggttgtgatctgattggtttaccactgaaatcccctcttgccttcaatgagatcata
tatgcacttcccatgcttactatcttaacagataaaggtactggcattgtgactagtgtc
ccaagtgattctccagatgatttcatggcactacaggatttagtcgcaaagccagctttg
agacagaagtatggtgtcaaagatgaatgggttcttccctttaaggttgtaccaataatc
aacattcctgaatttggagacaagtctgctgagaaggtgtgcctcgatcttaagattaag
agtcagaatgacaaggagaagcttgctgaagcaaaaaggatgacatatctgaaaggtttt
actgatgggacaatgattgtaggggagttcaatggcagaaaagttcaagaagcgaagcca
ctgataaagaacaagcttttggaagaaggcacagcagtgttgtatagcgagcctgagaag
aaagttatgtcgagatctggtgatgagtgtgttgttgctctcacagatcaatggtacatt
acttatggtgagactgaatggaagcagaaggcagttcaatgcttggagaagatgaataca
ttctcagctgaaactcgtaatggttttgaacacacgttaggctggctgaaccagtgggcc
tgctctcgttcttttggcctaggtactcgcattccatgggatgagcagttccttgtagaa
tctctttctgattccaccctctacatggcatattacacaatcgctcaccttttgcaaaat
ggcaacatgtatggcaaggaaatatcttctatcagaccagaacaaatgacagatgaagtc
tgggattatgtgttctgtgatggtccagcacccaatagtgacatccctcctgccctcttg
agcaaaatgaagctggaatttgagtactggtatccatttgatattcgtgtctctggtaag
gatcttatccaaaaccatctgactttcagcatttacaatcatacagcacttcttccagag
catcattggcctcgtggtttccgctgcaatggacatcttatgcttaattctgagaagatg
tccaagtccacagggaatttccgaactcttcgacaggccattgaagaattctcttctgat
gccactagatttgcccttgctgatgccggtgatggtatggatgatgcaaactttgtcttt
gaaacagcaaatgctgctattttgaggcttacaaaagaaattgcatggatggaagaggtt
atagccgctgaatcttctctgagagctgggcctccctctacctatgctgaccatgtgttt
gccaacgagataaacattgcggtgatagaaactgagaagagctacaatgccttcatgttc
agagatgcccttaagttggggttctatgacctacagttggctagagatgagtacagactc
tcttgtggagcagcaggcatgaatcgtgaattattatggcggttcatggaggtgcagact
aggctcattacccccatttgtccacactatgctgagcatgtgtggcgaaacatcctgagg
aaggaaggatttgcaataaaggcaggctggccaattgctggaaccccagatcccacacta
agaattgctaacaaatatttacaggactccatagttaaattcaggaagctgctccagaag
caagaatctggttccaagaaacccaagaagggaactgcacctcctccatctgagcaaaac
aagctgactgttggtctggtctacgtcaatgagaactattatggatggaaagagcaatgt
ttgagggttctccagtctaaatttgatagccaagcacgtttgtttgctcctgatgaggag
attaatgaagcattgaagaactgctccatcggacaggaaactaacttcaaacaagtccag
aagctctgcatgcctttcatcaagtcgaaaaaagatgaggcgaggagtgttgggccccac
gctttgaatttgaagcttccttttggtgaaatgagtgttctcgaggagaacttggagctg
atcaagaggcaggtaggccttgaacatgcagaggtcctgtctgcttctgatgaggctgct
cgtgctaaagctggcgtgcatgcttctatgctggacaagaccccgccttctcctggtgag
ccagtagcaatcttcatgagcaaactagacctcgaagcgcggtgctga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (5)   
   Pfam (5)   
All databases (53)   

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