KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112244754
Entry
112244754         CDS       T05605                                 
Name
(RefSeq) transcriptional repressor p66-alpha isoform X1
  KO
K23194  transcriptional repressor p66
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    112244754
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:otw03000]
    112244754
   03036 Chromosome and associated proteins [BR:otw03036]
    112244754
Transcription factors [BR:otw03000]
 Eukaryotic type
  Zinc finger
   Cys4 GATA-factors
    112244754
Chromosome and associated proteins [BR:otw03036]
 Eukaryotic type
  Chromatin remodeling factors
   NuRD complex
    112244754
SSDB
Motif
Pfam: P66_CC GATA TatD_DNase
Other DBs
NCBI-GeneID: 112244754
NCBI-ProteinID: XP_024268290
Position
LG06:20661083..20700449
AA seq 670 aa
MSEEAVRQTRSRKRALERDVVAPGSPGWELDSKKVKLENCDLLPAADGPIALVAVGGGGD
VVKTEQTAKVASMSILKTGEVKATIKVEVQTGDRPVDMSTSKSDVKKERQPLSPNNDVIV
LSDNELSIPIVNGLNYYRKTDTDLLRKSSPDERERIIKQLKEELRLQEAKLVLLKKLRHS
QIQKESTVQKPTSGSVATPPPLVRGSIASGKGPLQVSSGRSSGIVIPPPLVRGGQHVPSK
LNSQTVMPPLVRGAQVIYTLPIAVSPQQIASLRQQQHSGSAPPPLLLAPRASVPNVQVQG
QRVIQQGLIRVANVPNTNVLVNIPQGSQKGSSVTSQAAMGSGVSTVQANESPAARQVAAK
LALRKQLEKTLLEIPPPKPPAPERNFLPSAANNEFIYLMGLEEVVQNLLDTLGRGKKQGQ
SVTAIPMEPHTCAQCKTDFTSCWRSEKSGPVLCDQCMSSNLKKALKAQHTNRLKAAFVKA
LQQEQEVEQRILQQAASPVSKMPSSSSRMKSEQQQHVLVSQQYKQARAQLQLQQHRGTPM
ARHHSSIKQSSGQMSRSVQQVVGSRGVTHSFSTSSQQLQNAVTAASLVSRPGKHAMRPVQ
GTKGSSSNSSANPNAWRKQTTGNSGVTMGYVNPSLSVHKTTTSANLERQREYLLDMIPSR
SISQTANTWK
NT seq 2013 nt   +upstreamnt  +downstreamnt
atgtcggaggaggcggtgcgtcagacgcgcagccggaagcgggccctggagagggatgtg
gttgcccctggcagccctggatgggagctggacagtaagaaggtaaagctggagaactgt
gacctgctacctgcagcagatggacctatagctctagtggctgtgggtggaggaggagat
gtggtgaagactgagcagacagccaaggtggccagcatgagcatcctgaagaccggtgag
gttaaggctaccatcaaagtggaggtgcagactggggacaggcctgtagatatgagcaca
tccaagagtgacgtaaagaaagagagacaacccctgtcaccaaacaatgatgtcatagtg
ctgtcagataacgagctgtccatccccatcgtgaacggcctgaactactacagaaagaca
gacactgacctgctcaggaagagcagcccagatgagagggagcgcatcatcaaacagttg
aaggaggagctgagactccaggaggccaagctggtgctgctgaagaaactacgacacagc
cagatccagaaggagagcactgtacagaagccaacctctggctctgtggctactcctcca
cctctggtcagaggcagcatcgcatcaggcaaaggaccactacaggtgtcgtcaggccgt
agctcaggcatagtgatccctcctccattagtccggggtgggcagcacgtcccgtccaaa
ctgaactcccagactgtcatgccacccctcgtcagaggggcacaggtaatttatactctg
cccattgcggtgtctccccagcagatcgcgtccttgcggcagcagcagcactctgggtcg
gccccccctcccctgctgctggcccccagggcctcggtccccaacgtccaggtgcagggt
cagagggtcatccaacagggccttatcagggtggccaatgtccccaacaccaacgtcctg
gtcaacataccacagggctctcagaagggctcatctgtgacgtctcaggctgcgatgggc
agtggcgtgtccacggtccaggccaacgagtccccggctgctcgccaggtggccgccaag
ctggcgttgcgtaagcagctggagaagacactgctggagatccctcctcccaaacctccc
gcgcccgagcgcaacttcctgccgtcagcagccaacaacgagttcatctacctgatgggc
ctggaggaggtggtgcagaacctgctggacacactgggacggggcaagaaacagggtcag
tcagtgaccgccatccccatggagccgcacacctgcgcccagtgcaagacggatttcacg
tcgtgctggcgctcggagaagagcggccccgtcctgtgcgaccagtgcatgtcgtccaac
ctcaagaaggccctgaaggcgcagcacaccaaccgtctgaaggcggcctttgtcaaggcc
ctgcagcaggagcaggaagtagagcagcggatcctccagcaggccgcctcccccgtctcc
aaaatgccctcttcttcctcaaggatgaagagtgagcagcagcagcatgtgctggtgtct
caacagtacaagcaggcgagagcccagctccagctccagcagcatagaggcacgcctatg
gcccgccaccactcctccatcaagcagagctctggtcagatgtcccgtagtgtgcagcag
gtggtggggtctcgtggtgtcactcactcgttctccacatcctctcagcagctgcagaac
gctgtgactgcagcgtcgctggtcagcaggccaggtaagcatgccatgcgcccggtgcag
gggacaaagggcagcagcagtaactcctcggccaaccccaacgcctggaggaagcagacc
accgggaactcaggtgtgaccatgggctatgtgaaccccagcctgtctgtccacaagacc
accacctcagccaacctggagcgccagagagagtacctcctggacatgattccctcccgc
tccatctcccagacagccaacacatggaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (9)   
   RefSeq(pep) (9)   
DNA sequence (9)   
   RefSeq(nuc) (9)   
Protein domain (3)   
   Pfam (3)   
All databases (30)   

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