KEGG   Opisthorchis viverrini (Southeast Asian liver fluke): T265_11878
Entry
T265_11878        CDS       T04902                                 
Name
(RefSeq) hypothetical protein
  KO
K11267  sister chromatid cohesion protein PDS5
Organism
ovi  Opisthorchis viverrini (Southeast Asian liver fluke)
Brite
KEGG Orthology (KO) [BR:ovi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ovi03036]
    T265_11878
Chromosome and associated proteins [BR:ovi03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Adherin complex
    T265_11878
SSDB
Motif
Pfam: PDS5 SCD HEAT_2 Adaptin_N Nif11
Other DBs
NCBI-GeneID: 20326046
NCBI-ProteinID: XP_009176947
UniProt: A0A074YXC3
Position
Unknown
AA seq 1878 aa
MTMKSQEANPERSGIVFQLRLASMLHEVGTSAVIMPAYESLDGNSRDAEVGFKPRTFISI
NSRFKHGFIGLLRHCTHCSTLPVPSCLVPEGSTRAGILQGCPSLDGGSREAQVGFELRTF
QLVDSRSNHLSHLAHFNTKIEPEAFELQPIRGLNLLRLWSGKRHSPAISVCHCCSRRLTA
EKSPDRYIFTHEFISSRLRCAAIYLTSPNHRYNHRATSTWFLQLTLIMMMMTAESLPDVS
WEEQQNRVGRGLMKSVGYSIIYPHGCKELSESLRITDLRKRLNDLSAAFDKLLETGDFGD
SDGETTRYGDSSTQPAKFDYLKGLLLLLTSPAYTEHHDRDIQLRVCICICKMLKIFCPHN
PFSGMSDEKSLVKNLLQFLLDCIQLMAGVRDKGDVIYSKLHTIFYICCQIDLFLWCATVE
DESLLLQCVKTTFAIVKNISVWAWTEPSIILQMLLDMVVKVIMHSEGLLSRDVIAFILQF
LIEPVKTTQPEQHTFVRDLILRTSCHLEYNIQMVSSFDSFSPFLAPQLLQKSLLVGTANG
AVRKASGSGNSPRGDLDVHESEFLNDTDPIGEHIYSIIYELHTIQNSIVAPVLPTLELKL
KSPSERDRKRSFRLLARLFSEPNSLLHDSNPALWDAFLGRFNDINEDIRKLCVYMVPQMI
QQNPDLPRDQLLKCIQQRAYDQNEDVRLFVLRTVSSLINEAPLDIVANELCQLLIGRCRD
KSLSIRKEAATSLANMYKRLVQEPQPLADRLSAVANGILHMYYHSSVDDKIIVERLFKSS
LVPYHFNTSDRVRALLTCYGLLDEASVRAVREMFRMQYTVTVLLREILHLLSTQDGKKIS
VAGGTDLMDRLIALTNVLPKTDHKTVEQLKRFFNKAHSDESLRLQLVKLTKPTCTCSEAT
NILRYLIKHIDNSSSSVTAGGAEAHVQYIRCVKILLERFAPVLFDKTFGQELVSQLVVNR
ETAAQSSSVGPLDTLKALILLHSLSVYFTGILPTEGLASYLINILSDDSISADMAAPPRG
SSTTTAPTTTTQEADPQTTHELALSVFCSLLNGPGPLCDNGSEVPDFCSYPLHTDSAYDL
IDCTKDLLPLLKNFCSTGMTRQFPPVPCPVDSALQTLPPLPNGARLEEGKPARGRLKREV
SQRSVYLAGLAWRRERRRAKLAIQALLALYKSAQRFRLATEVEIKEAVDEIVKVCLACPS
ASPDYIACLTALGRIALRLPGVYNREFKQFTTKSLIPDVLARDSEIEEFGKVGSPDRSNA
VKRKQNQTTTHSNSAADWIPDGCVPQSTHFSDQAHEQLASRTEDRGETGSTSRHSTVAPN
HYPQRRSDRSRKIGAPGEMSRMRLVAATSWLKLAHSQCYVDSIEVDWYQSMTYILRDPCP
QVRSHFLTKLNQGLYRLRLPLEYMAMFAHAPNVPDAMFKQRAKQLLAANIQRRRDFLDRH
PSRLSDPKFLYALLPEFVLPYVIYLLAHVPEWTEPNDVDSLNRIKASLWFVMEPIVTRGH
NFLFIRKIIERIKHTRDALAPEDPIANTKLYLTCDVALGLLLTRCSDLTIKDYIIDVKLP
KSLFVATPTTFRNPDFEQLLNSSSRDAGSLTNVVRTPLIQFTPRKDTHTGKYLIPTELLK
DKRRAPAASGSESKEDVDNLSQPVPSQSCGPPVQTLATTVAAASSGKPTCSVATRQTKLM
SYALPKRVSSAAATESVSAIGGTEQPSTLVDRSLSPDQTTPRKRMHTVLDTSEVRLDTGG
SSPKEHTMHLSMSRVKCQRLNKSPSKSPPFRVESSRFTTVSKKPNVRSAPSKRELVQVAL
ASRTRQPKSHQKTTKSAIKTSTRSSTPSLTSTSTLSPSTSAPPHPQALTRKRGRPSKGST
TIKQSGRQTRLSALKSRK
NT seq 5637 nt   +upstreamnt  +downstreamnt
atgactatgaaatcccaagaagccaatcctgaacggagcggtatcgtcttccagctgcgt
ctagcatccatgctacacgaagtaggcacgagcgctgtgatcatgccagcttacgaaagc
ttagacggaaacagtcgagatgccgaggttgggttcaaaccacggaccttcatctcgata
aattcgcgcttcaaacacggctttattgggcttctgcgacattgtacacactgtagcacc
cttccggtgcctagctgcctagtacccgaaggaagcacgagggctgggatactgcaaggt
tgcccaagcctagacgggggaagtcgagaggcacaggtcgggttcgaactacggaccttc
cagttagtagattcgcgctctaaccacttgagccatctcgctcactttaatacaaagata
gaaccggaggcttttgagttacagcccataagaggcttgaatttacttcgactgtggagt
ggcaagaggcattctccagccatctccgtatgccactgttgtagccgtcgacttactgct
gaaaagtcccctgacagatatatatttactcacgaatttatcagttcccgccttcgatgc
gcagctatctacctcacctccccaaatcatcgctacaaccaccgtgcgacaagtacgtgg
ttcttacagttaacattgattatgatgatgatgactgctgagtctttgccggatgtttca
tgggaagaacaacagaaccgggttgggagaggcctaatgaagtcggttggatacagcatc
atctacccacatggatgcaaggaattgtccgaatccctgcgaatcactgacctgagaaag
cgactaaacgatctcagtgctgccttcgacaaacttttagaaactggcgattttggtgac
agtgatggagagaccacgcgttatggtgacagctcaacccagccagcaaagtttgattac
ttgaaagggctgttgcttcttctcacctcaccggcatacactgagcatcatgatcgagat
attcaactgcgagtttgtatctgtatatgcaagatgctgaaaatcttctgtccccacaac
cccttttctggcatgtcggatgagaagtctcttgttaagaatttattacaattcctattg
gattgtatccaactgatggcaggtgtgcgagacaagggcgatgttatttattcgaaattg
cacacaatattttacatatgttgccagattgatttgtttttatggtgcgccactgtcgaa
gatgaaagtctgcttcttcagtgcgtcaaaactacgttcgccattgtgaaaaatatttcg
gtctgggcatggacagagccgtcaattatcctacagatgcttttagatatggttgtgaaa
gttatcatgcattcagaaggactactatcgcgcgatgtcattgctttcatattgcaattt
ctgatcgaacccgtgaaaactacacagccagagcagcacacatttgtgcgagatttgatt
ttacgcacttcatgtcacctggagtacaatatacaaatggtaagcagctttgacagtttc
tcaccgtttctcgcaccacagctgctacagaaatctttgcttgttggtacggctaacggt
gccgtaagaaaagcctcaggtagtgggaattccccgagaggtgatctagacgtccatgag
tctgagtttttaaacgatactgacccgattggagaacacatatactctattatttatgag
ctgcatacaatccagaacagtattgttgctcccgttttacctactttggaactcaagctc
aagtcgccttcagaacgtgaccggaagcgttcgttcaggttgttggcccgtttgttttcc
gaacccaactctctactacatgacagtaatccagccttgtgggatgcgtttctgggacgt
tttaatgatataaacgaggatatacgaaagctctgtgtctatatggtaccgcaaatgata
cagcagaacccagacctgccgcgtgaccagctattgaagtgtattcaacagcgcgcctac
gatcaaaacgaagatgttcgcttgtttgtgctgcgaacagtttcctcgctgattaacgaa
gctccactggacattgttgcaaatgaactttgtcagttactgattgggcgttgtcgggac
aagtctttatccatccggaaagaggctgccacttctctggccaacatgtacaaacgtctg
gttcaggagccacaacctctagcagatcgactgtctgctgtggctaacggcatcttacat
atgtactaccattcatctgttgatgataaaatcattgttgagcgactattcaagagctca
ttggtaccctatcacttcaacacaagtgaccgagttcgtgcactgctgacttgctatggc
ctcctggatgaagcctctgtacgcgcagttcgggaaatgttcagaatgcagtacacggtg
acggttcttctcagggaaattctacatctgctgtccacacaagacggtaagaagatttct
gtagcgggtggtacggatttgatggaccgtctgatcgcgttgacgaacgtattaccgaaa
acagatcacaagaccgtcgaacagctgaaacgtttcttcaacaaagctcattcagacgaa
tcactgcgtctgcagctggtcaaactaactaagccgacgtgcacgtgctctgaagcgacc
aacatcttgcggtatctcatcaagcacattgataattcatcttcatctgtcaccgccgga
ggagccgaggcgcatgttcaatatatccgttgcgtgaagatccttctcgaacgattcgct
cctgtcttgtttgacaaaacctttggtcaggagcttgtgtcacagctcgtagttaaccgt
gaaacggcagcacaatccagctcagtgggcccattggataccttaaaagcactgattctt
ctgcattccctgtcagtttacttcacaggaatactaccaactgaggggttggcgagttac
ctgatcaacatcctgtcggacgactcgatatctgcggacatggcggcgccgcctcgcggg
tcttctacgacaacggcaccaacaacaacaacacaggaagctgatccgcaaacgactcat
gaactggcactaagcgttttttgctccctacttaatggacccggaccactatgcgataat
ggttcagaagttcctgacttttgttcgtatccacttcatactgattccgcttacgatttg
attgactgtacaaaggatcttttacccctactgaagaacttctgttctaccggcatgact
cgacagttcccaccagttccttgtccggtagattctgcactacagaccctacctccttta
ccgaacggagctcgtcttgaggaaggtaaacctgctcgaggaaggctaaaacgagaggtc
agccaacgtagtgtatatctcgccggtctcgcttggcgtcgagagcgccgaagagctaag
cttgccattcaggcattattggctctatataaaagtgctcaacgttttcggttggcaact
gaagtggagatcaaagaggcagtcgatgagatcgtcaaggtttgtcttgcatgtccctcc
gcctcccccgactatattgcgtgcctgactgctcttggacgcatcgccttacgtttacct
ggtgtgtacaaccgggaattcaaacagtttaccaccaaatcgttgatcccagacgtgctt
gctcgtgattcagagattgaagagttcgggaaggttggctcgcccgatcggtcgaatgct
gtcaagcgaaagcaaaatcagactactacacattcgaactcagcagctgactggattccc
gatggctgtgttccccaatctactcatttcagcgaccaagctcatgagcagctggcttcg
aggactgaagatcgaggagaaaccggtagcacaagccgtcattcgactgttgcaccgaat
cattatccacaacggagatctgacaggtcaagaaaaattggcgcaccgggtgagatgtca
cgaatgcgattggtcgccgccacgtcgtggttaaagctggcccattcgcaatgttacgtt
gacagtattgaggtggactggtatcaatcgatgacatacatcttacgtgatccttgtccc
caagtccgttcacatttcttgaccaaacttaatcaaggcctctacagacttcggttaccc
ctggaatatatggctatgttcgcgcacgcaccgaatgtcccggatgcgatgtttaagcag
cgtgccaaacagttgttagccgcaaatattcagcgtcgtcgagacttcctcgatcgccac
ccatcccgcttgagtgatccaaaattcctgtacgctcttcttcctgagtttgtactacca
tatgtaatctacctgttggcacacgttcctgagtggactgagcccaatgatgttgacagt
ctcaatcggatcaaagcttcgttgtggtttgttatggagccaattgtcacacgtggacac
aatttcttgtttattcggaaaatcatcgagcgaatcaagcatactcgggatgcactggcc
ccggaagatcctatcgccaacacaaaactctacctcacttgcgatgtggcacttggtctg
ttgctcactcgatgttccgaccttacaatcaaagattatataattgacgtgaaactaccg
aaatccctatttgtcgccacgccgacaacattcagaaaccctgactttgagcaactactg
aattcttcgtctcgggatgctggcagtctgacgaacgtcgtccgcacaccactgatacag
ttcactcctagaaaagacacccatacgggaaagtatctgatacctacagagttactcaag
gataaacgacgtgccccagctgcatccgggtccgaatccaaagaagacgttgacaatcta
tcccagccagttccttcacaatcctgtggtccaccggtacaaacattggctaccacagtg
gcagctgcttctagcgggaaacctacgtgttccgtagccactagacaaaccaaactaatg
tcgtacgcgttgccgaaaagagtgtcgtcagctgcagccacagaatctgtatccgcgatt
gggggaactgaacaaccatccaccttagtggatcgtagtttatcgcccgaccaaactact
ccaaggaaacgcatgcatactgtcttggatacttctgaggtgagattagatacgggtggt
agctcaccaaaagagcacacgatgcatttatcaatgagtcgtgtgaagtgtcagcgactc
aacaaatcgccatccaaatcacccccttttcgagtagaatcttcgcgtttcacaaccgta
tcaaagaaaccgaacgttcgatcagcaccttcaaagagagagcttgtccaggttgcattg
gcttcacgtactagacaaccgaaatcccatcaaaaaacaaccaaatccgccatcaaaacc
tccacccgttcatccactccatctttaacttcgacgtcaacactctctccctctacttcc
gcaccgccgcacccacaagctttgacacgcaagcgtggcagaccgtcaaaggggtctaca
accattaaacagtcgggtcgtcagacgagattgtctgcgttgaagtcgaggaagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (55)   
   KEGG ORTHOLOGY (1)   
   RefGene (51)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (66)   

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