KEGG   Pyrococcus abyssi: PAB0255
Entry
PAB0255           CDS       T00024                                 
Symbol
xerD-like
Name
(GenBank) xerC/D integrase/recombinase protein
  KO
K04763  integrase/recombinase XerD
Organism
pab  Pyrococcus abyssi
Brite
KEGG Orthology (KO) [BR:pab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pab03036]
    PAB0255 (xerD-like)
Chromosome and associated proteins [BR:pab03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    PAB0255 (xerD-like)
SSDB
Motif
Pfam: Phage_integrase Phage_int_SAM_1 Phage_int_SAM_4 Phage_integr_3 Integrase_1
Other DBs
NCBI-ProteinID: CAB49304
UniProt: Q9V1P5
Structure
Position
372604..373464
AA seq 286 aa
MEEREERVRDDTIEEFATYLELEGKSRNTVRMYTYYISKFFEEGHSPTARDALRFLAKLK
RKGYSTRSLNLVIQALKAYFKFEGLDSEAEKLKTPKMPKTLPKSLTEEEVRRIINAAETL
RDRLILLLLYGAGLRVSELCNLRVEDVNFEYGVIVVRGGKGGKDRVVPISESLLSEIKRY
LESRNDDSPYLFVEMKRKRKDKLSPKTVWRLVKKYGRKAGVELTPHQLRHSFATHMLERG
IDIRIIQELLGHSNLSTTQIYTKVSTKHLKEAVKKAKLVESIIGGS
NT seq 861 nt   +upstreamnt  +downstreamnt
gtggaggagagggaggagagagtgagggatgatacaattgaagagtttgcaacctatcta
gagcttgaggggaagagcaggaacaccgttaggatgtacacctactatatctctaaattt
tttgaagagggtcactctccaactgctcgagatgccctgaggtttcttgccaagttgaag
aggaagggatattctactagaagcctaaacttagtgattcaggcgttgaaggcgtacttt
aaattcgaaggtcttgattccgaagccgagaagttaaaaaccccaaagatgccgaagacc
ctaccaaagagcttgaccgaggaggaagtaagaaggataatcaacgctgcagagaccctt
cgggacaggcttatccttctcctcctctacggcgctggattaagggtttcggagctctgt
aaccttagagttgaggatgtgaacttcgaatatggggttatagttgtgagaggaggaaag
ggtggaaaagatagggtagttcctatctccgaatcgctgctctcggaaataaagaggtac
ctagagtcgagaaacgatgatagcccatacctattcgtggagatgaagaggaagaggaag
gacaaactttcccctaagacagtttggaggcttgttaagaaatacgggaggaaggctggg
gttgagttgacccctcatcaactcaggcatagcttcgctactcacatgctcgagaggggg
atagacataaggataattcaagagctcctgggtcactctaacctctcgacgacccaaatc
tatacgaaggtctccactaaacatctgaaggaagccgttaaaaaggcaaaactagttgag
agcatcatcgggggttcctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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