KEGG   Salipiger abyssi: Ga0080574_TMP1676
Entry
Ga0080574_TMP1676 CDS       T04681                                 
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
  KO
K07259  serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
Organism
paby  Salipiger abyssi
Pathway
paby00550  Peptidoglycan biosynthesis
paby01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:paby00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Ga0080574_TMP1676
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:paby01002]
    Ga0080574_TMP1676
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:paby01011]
    Ga0080574_TMP1676
Enzymes [BR:paby01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     Ga0080574_TMP1676
Peptidases and inhibitors [BR:paby01002]
 Serine peptidases
  Family S13: D-Ala-D-Ala peptidase C family
   Ga0080574_TMP1676
Peptidoglycan biosynthesis and degradation proteins [BR:paby01011]
 Peptidoglycan biosynthesis and degradation
  DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
   Ga0080574_TMP1676
SSDB
Motif
Pfam: Peptidase_S13 Beta-lactamase2 Peptidase_S11
Other DBs
NCBI-ProteinID: APZ52010
UniProt: A0A1P8URH4
Position
complement(1002771..1004270)
AA seq 499 aa
MTQRISRRGFLTSVAAAGFTAASPALANAPTQSLRPVARGEDLSLRNLKTAEELIAAARL
DGQVSFSAIDLKTGALLEAHAADTGLPPASVAKALTASYALDTLGPAYRFKTEIVATGGV
SEGMVQGDLILLGGGDPTLDTDGLGELVAMLAEKGIKGLRGKFLVCGSALPYTRSIDPAQ
PEHVGYSPAVSGLNLNFNRVHFEWHRGGDSYQVSMDARSASLRPTVRMASMGVVARDMPV
YTYHDAGARDEWTVARGALGNGGARWLPVRKPELYAGEVLQALSASKGIKLPAPQVVENC
PEGAVLASRESAPLRVVLRDMLKWSTNLTAESVGQTATRARLGQVASLRESAEAMNLWAR
ETLGLTHVALVDHSGLGDQSRIASADMAKALLEIRQRIGLKPLLKSFPMRDNKRRIIENH
PVKVHAKTGTLNFVSGLAGFADLPDGSELVFAIFCGDLDRRASLTRAQRERPEGARSWNV
RAKTLQQGLIERWAVLSEA
NT seq 1500 nt   +upstreamnt  +downstreamnt
atgacgcaacggatttcaaggcgtggatttctgacttcggtcgcggcggcgggcttcacg
gcggcatcgcccgccctggccaatgcgcccacgcagtcgctgagaccggtggcgcgcggc
gaagatctgagcctgcgcaacctcaagacagcggaggagctgatcgccgccgcccggctc
gacgggcaggtgagcttttcggcgatcgatctcaagaccggcgcactgctggaggcgcat
gcggcggataccggactgccgccggccagcgtcgccaaggcgctgaccgcctcctatgcg
ctggacacgctcgggcccgcctacaggttcaaaaccgagatcgtcgcgaccggcggcgta
tcggaagggatggtgcagggcgatctgatcctgctcggcggcggcgacccgacactcgac
accgacggtcttggcgagttggtcgcgatgctggcggaaaagggcatcaagggtctgcgc
ggcaagttcctggtctgcggcagcgccttgccctacacgcgctcaatcgacccggcgcag
cccgaacatgtgggctacagccctgcggtgtcggggctgaacctgaatttcaaccgtgtg
catttcgaatggcatcgcggcggtgacagctatcaggtcagcatggatgcgcgatccgcc
tccctgcgcccgacggtgcgcatggcaagcatgggcgtggtggcgcgcgacatgcccgtt
tatacatatcatgacgccggcgcgcgcgacgaatggacggtggcgcgcggcgcgctgggc
aatggcggcgcacgctggctgccggtgcgcaagcccgaactctacgccggcgaggtgctg
caggcgctgagcgcgtccaaagggatcaagctaccggcgccgcaggtggtggagaactgc
ccggagggcgcggtgctggccagccgcgagagtgcgccgctgagagtggtgctgcgcgac
atgctgaaatggtcgaccaacctgaccgccgagtcggtgggccagacggcgacccgggcc
cggctggggcaggtggcatcgttgcgcgagtcggcggaggcgatgaacctctgggcgcgc
gaaacgctggggctcacccatgtggcgctggtcgatcactccggcctgggagaccagagc
cgcatcgcctcggcggacatggccaaggcgctgctggagatccggcagcgcatcgggctg
aagccgctgctcaagagctttccgatgcgcgacaacaagcgccggatcatcgagaaccac
ccggtcaaggttcatgccaagaccggcacgctgaatttcgtcagcgggttggcgggcttt
gccgatctgccggacggctcggagctggtctttgcgatcttttgcggcgatctggaccgc
cgcgcctcgctcacccgggcgcagcgcgagcgtcccgagggtgcgcggtcgtggaacgtg
cgcgccaagacgctccagcaggggctgatcgagcgctgggcggtgctgtcggaggcgtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (29)   

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