KEGG   Cutibacterium acnes HL096PA1: PAGK_0008
Entry
PAGK_0008         CDS       T02638                                 
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
pach  Cutibacterium acnes HL096PA1
Brite
KEGG Orthology (KO) [BR:pach00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pach03032]
    PAGK_0008
   03400 DNA repair and recombination proteins [BR:pach03400]
    PAGK_0008
Enzymes [BR:pach01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     PAGK_0008
DNA replication proteins [BR:pach03032]
 Prokaryotic type
  DNA Topoisomerases
   PAGK_0008
DNA repair and recombination proteins [BR:pach03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      PAGK_0008
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3
Other DBs
NCBI-ProteinID: AGJ78882
Position
9734..11806
AA seq 690 aa
MSQPEMPESVTDGDTPEDLLIDATDHPDGLDSELPPTAVDGSYDAGQITVLEGLEAVRKR
PGMYIGSTGERGLHHCVYEIVDNSVDEAMAGYCDTIQVELLDDNWCQVTDNGRGIPVKEH
PVEHIPTVTLVLTKLHAGGKFGNGGYKVSGGLHGVGSSVVNALAAHFIVEVRRDGYHWRQ
SFSLGEPDGPLEQLEALGPDDHEGTTVRFQPSDEIFDAIVFDYQTLSNRFREMAFLNKGL
RIVLTDRRADHADEDGNPVHEDFLYKEGLKDYVRFLTGTRDVINPTIISLESHRPEEGMG
LEIAMQWNTSYATSVHTFANAINTIEGGAHEEGFRAALTNTVNRWGETWGLIKKREDRVS
GDDIREGLTAVVSIKLTEPQFEGQTKTKLGNAEAKSFVQKALNEKLSDWFEENPNEGKSI
VRKSQAAAQARVAARKARDLARNRKGLLGSTSLPGKLKDCSSTSPEECEIFIVEGDSAGG
SASQGRDPRIQAILPLRGKILNVEKARLDRALGSETIESIINALGTGVHEDFDLDKLRYH
KIILMADADVDGAHIRTLLLTLLFRFMRPVIDAGHVYLAQPPLFRLRWTNSPHELAYSDE
ERDLLREDGLTHGKKLPQVNPIQRYKGLGEMDAEDLWDTTMDPDKRLLLQVTLEDAALAD
QMFSILMGEDVEQRRSFIQRNAKDVRFLDI
NT seq 2073 nt   +upstreamnt  +downstreamnt
gtgagccagcccgagatgcccgagtccgtgaccgacggggacacccccgaggaccttctc
attgatgctaccgatcatcctgatggtctggactcagagcttcccccgacggccgtcgac
ggttcctacgatgccggtcaaatcaccgtcttagaaggcttggaggccgttcgtaagcgt
cccggcatgtatatcggctctactggggagcgcgggttgcatcactgcgtctatgagatt
gtcgataactccgtcgacgaggcgatggccggttattgcgacaccatccaggttgagtta
ctcgacgataactggtgccaggttaccgataacgggcgagggattcccgtcaaggagcac
cccgtcgaacacatccctaccgtcactttggtactgaccaagctgcacgccggcggtaag
ttcggcaacggcggttacaaggtctccggtggtctacacggcgtcggctcctcggttgtt
aatgctctagcggcccacttcatcgtcgaggtccgacgagacggctaccactggcgtcag
tccttcagcctcggtgagcctgacggtccgctggagcagcttgaggcactcggccccgac
gatcacgaaggcaccacggtgcgtttccagccctccgacgagatcttcgatgccatcgtt
ttcgactaccaaaccttgtcgaaccgtttccgtgaaatggccttccttaataagggtctg
cgtatcgtgctcaccgaccgccgtgccgaccacgctgatgaggacggcaacccggttcac
gaggacttcctctataaggaggggcttaaggactacgtccgattcctcacggggacccgc
gacgtcatcaaccccaccatcatctccttggagtcccaccgtcccgaggagggtatgggt
ttggagattgcgatgcagtggaacacctcgtacgccaccagcgtccacactttcgccaac
gccatcaacaccatcgagggcggagctcacgaggaaggcttccgtgccgctctcaccaac
accgttaatcggtggggtgagacttggggactcatcaagaagcgtgaggatcgcgtttcc
ggtgacgacatccgcgagggcctgacagccgtcgtctccatcaagctcaccgagccgcag
ttcgagggccagacaaagaccaaactcggcaacgccgaggccaaatctttcgttcaaaaa
gcccttaatgagaagctctcggactggttcgaggagaatcccaatgagggcaagagcatc
gtccgaaagtcacaagccgctgcccaggctcgcgtagccgctcgcaaggcccgcgatctg
gcccgtaaccggaaaggcctgctggggtcgacgtcactgcccggcaaactcaaggactgc
tcctcaaccagcccggaagagtgcgagatcttcattgtggagggcgactccgctggtggt
tcggcctctcagggccgtgatccacgtattcaggcgatcctgccgttgcgaggaaagatc
ctcaatgttgaaaaagcccgcctcgaccgcgcgttgggttcggaaactattgagtcgatc
attaacgcgttaggaaccggcgtccacgaggacttcgatctggacaaactgcgttaccac
aagatcatcctcatggcggacgccgacgttgacggcgctcatatccgcaccctgctactg
accctgctgttccggttcatgcgtccggtcattgacgctggccacgtctacctggcacag
cccccgctgttccgactgcggtggacgaactccccgcacgagctcgcctactccgacgaa
gagcgcgacctgctgcgcgaagacggtctgacccacggcaagaagctgccccaagttaac
ccgatccagcggtacaaaggtctgggcgagatggacgccgaagacctgtgggacaccacc
atggaccccgacaagcgtctgctgctccaggtgacccttgaagacgccgcgctggccgac
cagatgttctccatcctcatgggtgaggacgtcgaacagcgccgatcgttcattcagcgc
aatgccaaggacgtccgcttcctcgacatctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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