KEGG T03470: TIA1EST1

Cutibacterium acnes hdn-1: TIA1EST1_05130

Entry

TIA1EST1_05130    CDS       T03470

Name

(GenBank) DNA topoisomerase IV subunit A

K02469

DNA gyrase subunit A [EC:5.6.2.2]

Organism

pacn Cutibacterium acnes hdn-1

Brite

KEGG Orthology (KO) [BR:pacn00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pacn03032]
    TIA1EST1_05130
   03400 DNA repair and recombination proteins [BR:pacn03400]
    TIA1EST1_05130
Enzymes [BR:pacn01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     TIA1EST1_05130
DNA replication proteins [BR:pacn03032]
Prokaryotic type
  DNA Topoisomerases
   TIA1EST1_05130
DNA repair and recombination proteins [BR:pacn03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      TIA1EST1_05130

SSDB

Motif

Pfam:

DNA_topoisoIV DNA_gyraseA_C

Other DBs

NCBI-ProteinID:

AID35818

Position

complement(1113873..1116407)

AA seq 844 aa
MTKKTVDDDFTENIIDVDVSREMENSFLEYAYSVIYSRALPDARDGLKPVQRRILYTMGD
MGVRPDRPHVKSARVVGQVMGQLHPHGDAAIYDALVRTAQPWAMRLPLVDGHGNFGSLDA
GPAAMRYTECRMAPPALTMIDGLDEDTVDFEPNYDGKETEPSVLPAAFPNLLVNGASGIA
VGMATNIPPHNLVEVVAALRHMLDHPNADFDEIMRFVPGPDLPTGGRIIGLDGIADAYCT
GRGSFKIRATARIEKVSPRRRGIVVTELPYMVGPERIIDQIKTLVQSKKITGIADVKDLT
DLTNGTRLVIEVKNGINPEALLERLYKLTKLEDSFAINAVSLVEGQPRTLGLLEMLQVYL
DHRLDVTLRRTKFQLNKAQDRLHLVEGLLLAIVDIDDVIAIIRSSEDAAAARTRLMGTFD
LDEVQANYILDMQLRRLTKFSTIELESERDELRERIEGLTLIVNDKAELRRVVSGELVEV
SSKYGTPRRTVLLGAAPSVAAASAPLEVPDDPCWVLLSATGLLARIDTADGLPSDGDRAT
HDVIISSARTTARGDFGIITSAGRLVRVHAVELASLPITATAPSVAGGTPLADLVGLEKG
ERALAVTSLSGAGPSLALGTRNGIVKRVNPELLGKESWEVIGLKNGDEVVGAVEMGDEDL
ELCFVTQGAALLHFPASAVRPQGRSGGGVAGIKAKDPVIFFGAAPRRGSSVVTVAASSPA
AAGKEPGSIKLTPFDQYPPKGRATGGMRCQRFLKGETALVFAWIGPDPAVACAASGVPIE
LPAPNMRRDGSGDQGRQPILAVGSRRHGSNKGNPVSDGSNDALDSGDPLSTNEKQIDSQP
ELFS

NT seq 2535 nt +upstreamnt +downstreamnt
atgactaaaaagacggtggatgacgacttcaccgagaacattatcgacgtcgacgtctcc
cgcgagatggagaacagcttcctggagtacgcatactccgtcatctactcccgcgccctg
cctgacgcccgggacggcctcaagcccgtacagcgccgcatcctttacaccatgggagac
atgggagttcgccctgaccgtccccatgtgaagtcagcgcgagtcgtcggacaggtcatg
ggtcagctgcacccccacggcgacgctgccatctacgacgccctggtacgcaccgctcag
ccatgggcgatgaggctccccctcgtcgacggtcacggtaacttcggatcccttgacgcc
ggccccgctgccatgcgttacaccgagtgtcggatggcaccgccagctcttaccatgatc
gatgggctcgacgaagacaccgttgacttcgaacctaactacgacggcaaagagaccgag
ccctcagtgttgccggccgccttcccgaacctgctcgtcaacggggcttcgggtatcgca
gtgggtatggcaaccaacatcccaccacataacctcgtcgaggttgtggcagctctccgt
catatgctcgatcatccaaacgccgactttgacgagatcatgaggttcgtgcccggaccg
gatctgccgaccggtggacgaatcatcggtcttgatggcatcgccgacgcctactgcacc
ggccgtggctccttcaagatccgtgctaccgcccgcatcgagaaggtttctccacgacgc
cgcggcatcgtcgtcaccgagctgccgtacatggtcggaccagagcgaatcatcgaccaa
attaagaccctggtacagtccaaaaagatcaccggtatcgccgacgtcaaggacctcacc
gacctgaccaacggcacccgtctggtcattgaggtcaagaacggcatcaaccctgaagcc
ctgctggagcggctctacaaacttaccaagctggaggattccttcgccatcaatgcggta
agtctggtggagggacaaccccgcaccttaggcctgctagaaatgttgcaggtctacctc
gaccaccgtctcgacgtcaccctgcgacgcacgaagttccaactcaacaaggcccaggac
aggctgcacctcgtcgagggtctgctattggccatcgtcgacatcgacgacgtcatcgcg
atcatccgctcctccgaagacgccgcagcagcccgtacccgcctcatgggaaccttcgac
ctcgacgaggtgcaggccaactacatcctggacatgcagctgcgccgcctgaccaagttc
tccactatcgaactggaatctgagcgtgacgaactgcgcgaacgcatcgaagggctaacg
ctcatcgtcaatgataaggccgagttgcgtcgcgtggtgtccggagaattggtcgaagtg
tcgtccaaatacggcactccgcgtcgcactgtgctgttaggagccgcgccatcggtcgca
gcagcatcagcccccctcgaggtgccagacgacccgtgttgggtactgctgtcggcaact
ggcttgctggcccgtatcgataccgccgacggccttcccagtgacggggacagggccact
cacgatgtcatcatctctagcgctcgcaccaccgcccgtggtgatttcggcatcattact
agtgccggtcgtctcgtgcgtgtccatgctgtcgaactcgcaagcctgccgataaccgca
actgcgccgtcagtagccggtggcaccccgctagccgaccttgtcggtttggagaagggc
gagcgagctctagccgtgacaagcctgtcaggagcgggcccttccttggctcttggtacc
cgaaacggcatcgtcaagagggtcaacccggaactactcggcaaggagtcttgggaggtt
atcggtcttaagaacggtgacgaggtcgtcggtgccgtcgaaatgggcgacgaggacctc
gaactgtgcttcgtcacccagggcgccgccctgcttcacttccctgcatccgcagtgcgc
ccgcagggacgctcaggtggcggtgtggccggtatcaaggccaaggatccagtgattttc
tttggcgctgccccccgacgcggatcctcggtggtaacggtggccgcatcttcccccgcc
gccgcaggtaaggaacccggctcgatcaaactcacccccttcgaccagtacccgcccaag
ggacgagccaccggtggtatgaggtgtcagcgattcctcaagggagagacggccctggtg
ttcgcttggatcggccccgatccggccgtggcctgtgccgcgtccggggtgcccatcgaa
ctgccagcacctaatatgcgtcgagacggctccggtgatcagggacgtcaaccgattctg
gccgtcgggagtcgtcgtcacgggtctaacaagggtaatccggtatccgacggatcgaac
gatgcattggattccggtgacccgttatcgactaatgagaagcagatcgattcccaaccc
gaactgttcagctga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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