KEGG   Pseudomonas aeruginosa PAO1: PA2612
Entry
PA2612            CDS       T00035                                 
Symbol
serS
Name
(RefSeq) serine--tRNA ligase
  KO
K01875  seryl-tRNA synthetase [EC:6.1.1.11]
Organism
pae  Pseudomonas aeruginosa PAO1
Pathway
pae00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:pae00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    PA2612 (serS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:pae01007]
    PA2612 (serS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pae03016]
    PA2612 (serS)
Enzymes [BR:pae01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.11  serine---tRNA ligase
     PA2612 (serS)
Amino acid related enzymes [BR:pae01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   PA2612 (serS)
Transfer RNA biogenesis [BR:pae03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    PA2612 (serS)
 Prokaryotic type
    PA2612 (serS)
SSDB
Motif
Pfam: tRNA-synt_2b Seryl_tRNA_N FmiP_Thoc5 TerB_C DUF5788 FapA FlgN Exo84_C
Other DBs
NCBI-GeneID: 882318
NCBI-ProteinID: NP_251302
UniProt: Q9I0M6
Structure
Position
complement(2953416..2954696)
AA seq 426 aa
MLDPKLVRTQPQEVAARLATRGFQLDVARIEALEEQRKSVQTRTEQLQAERNARSKAIGQ
AKQRGEDIAPLLADVDRMGSELEEGKRQLDAIQGELDAMLLGIPNLPHESVPVGADEDAN
VEVRRWGTPKTFDFEVKDHVALGERHGWLDFETAAKLSGARFALMRGPIARLHRALAQFM
INLHTAEHGYEEAYTPYLVQAPALQGTGQLPKFEEDLFKIGRDGEADLYLIPTAEVSLTN
IVSGQILDAKQLPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVDPATSYEA
LEGLTANAERVLQLLELPYRVLALCTGDMGFGATKTYDLEVWVPSQDKYREISSCSNCGD
FQARRMQARYRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSIRVPEVLKPYMA
GIEVIG
NT seq 1281 nt   +upstreamnt  +downstreamnt
atgctcgatcccaaactggtacgcacccagccgcaagaagtggctgcccgcctggccacc
cgtggcttccaactggatgtcgcacgcatcgaagcgctggaagagcagcgcaagtcggta
cagacccgtaccgagcagctgcaagccgagcgcaacgcgcgttccaaggcgatcggccag
gccaagcagcgtggcgaggacatcgcgccgctgctggccgatgtcgaccgcatgggctcc
gagctggaggaaggcaagcgccagctggacgccatccagggcgaactggatgccatgctg
ctgggcattcccaacctgccacacgagtcggtgccggtcggtgccgacgaggacgccaac
gtcgaagtgcgtcgctggggcacgccgaagaccttcgatttcgaggtcaaggaccatgtc
gccctcggtgaacggcacggctggctggatttcgagaccgctgccaagctttccggcgcg
cgcttcgccctcatgcgcggcccgatcgcccgcctgcatcgcgccctggcgcagttcatg
atcaacctgcataccgccgagcatggctacgaggaggcctacaccccctatctcgtccag
gctccggcgctgcaaggcaccggccagttgccgaagttcgaggaggacctgttcaagatc
ggccgcgacggcgaagccgacctctacctgatcccgaccgccgaggtttcgctgaccaac
atcgtctccgggcagatcctcgacgccaagcagttgccgctgaagttcgtcgcccatacc
ccgtgcttccgcagcgaggccggtgcctccgggcgcgatacccgcgggatgatccgccag
caccagttcgacaaggtggagatggtgcagatcgtcgatccggccacctcctacgaagcg
ctggaaggcctgaccgccaacgccgagcgcgtcctgcaactgctcgagctgccgtatcgg
gtgctggcgctgtgcaccggcgacatgggcttcggtgcgaccaagacctacgacctggaa
gtctgggttcccagccaggacaagtaccgcgagatttcctcctgctccaactgcggcgac
ttccaggcccggcgcatgcaggcccgctaccgcaatccggaaaccggcaagcccgagctg
gtgcacaccctcaacggctccggcctggccgtcggccgtaccctggtggcggtactggag
aactaccagcaggcggacggctcgatccgtgtgccggaagtcctcaagccctacatggct
ggcatcgaggtgatcggctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
3D Structure (3)   
   PDB (3)   
Protein domain (8)   
   Pfam (8)   
All databases (46)   

Download RDF
DBGET integrated database retrieval system